MirGeneDB 2.1
MirGeneDB ID

Dre-Mir-129-P1a

Family name MIR-129 (all species)
Seed UUUUUGC
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-129-4
Paralogues Dre-Mir-129-P1b  Dre-Mir-129-P2a  Dre-Mir-129-P2b 
Orthologues Ami-Mir-129-P1  Bta-Mir-129-P1  Cfa-Mir-129-P1  Cpi-Mir-129-P1  Cpo-Mir-129-P1  Dno-Mir-129-P1  Ete-Mir-129-P1  Gga-Mir-129-P1  Gja-Mir-129-P1  Gmo-Mir-129-P1a  Hsa-Mir-129-P1  Lch-Mir-129-P1  Loc-Mir-129-P1  Mal-Mir-129-P1a  Mml-Mir-129-P1  Mmu-Mir-129-P1  Mun-Mir-129-P1  Oan-Mir-129-P1  Ocu-Mir-129-P1  Pbv-Mir-129-P1  Pma-Mir-129-o1  Rno-Mir-129-P1  Sha-Mir-129-P1  Spt-Mir-129-P1  Tgu-Mir-129-P1  Tni-Mir-129-P1a  Xtr-Mir-129-P1 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Chordata
Genome context
(danRer11)		 chr25: 30176484-30176548 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACUUCAGACUGCGAUUUGUCUUUCGCGAAUCUUUUUGCGGUCUGGGCUUGCUGUUCAUAAGUAUCUAGCUGGGAAGCCCUUACCCCAAAAAGCAUUUGCGGAAGGCGCAUUCACCGAAUGAUGCU
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Structure
        10          20        30         40        50        60 
ACUUCAGACUGCGAUUU--             -|      C   CU      G UGUUCAUAA 
                   GUCUUUCGCGAAU CUUUUUG GGU  GGGCUU C         G
                   CGGAAGGCGUUUA GAAAAAC CCA  CCCGAA G         U
UCGUAGUAAGCCACUUACG             C^      C   UU      G GUCGAUCUA 
   120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-129-P1a_5p
mirBase accessionMIMAT0001825
Sequence 
0- CUUUUUGCGGUCUGGGCUUGC -21
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Star sequence

Dre-Mir-129-P1a_3p*
mirBase accessionMIMAT0003158
Sequence 
43- AAGCCCUUACCCCAAAAAGCAU -65
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