MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-129-P2a

Family name MIR-129 (all species)
Seed AGCCCUU
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID
Paralogues Tni-Mir-129-P1a  Tni-Mir-129-P1b  Tni-Mir-129-P2b 
Orthologues Aca-Mir-129-P2  Ami-Mir-129-P2  Bta-Mir-129-P2  Cfa-Mir-129-P2  Cja-Mir-129-P2  Cli-Mir-129-P2  Cmi-Mir-129-P2  Cpi-Mir-129-P2  Cpo-Mir-129-P2  Dno-Mir-129-P2  Dre-Mir-129-P2a  Eca-Mir-129-P2  Ete-Mir-129-P2  Gja-Mir-129-P2  Gmo-Mir-129-P2a  Hsa-Mir-129-P2  Laf-Mir-129-P2  Lch-Mir-129-P2  Loc-Mir-129-P2  Mal-Mir-129-P2a  Mdo-Mir-129-P2  Mml-Mir-129-P2  Mmr-Mir-129-P2  Mmu-Mir-129-P2  Mun-Mir-129-P2  Neu-Mir-129-P2  Oan-Mir-129-P2  Ocu-Mir-129-P2  Pab-Mir-129-P2  Pbv-Mir-129-P2  Pma-Mir-129-o2  Rno-Mir-129-P2  Sha-Mir-129-P2  Spt-Mir-129-P2  Sto-Mir-129-P2  Tgu-Mir-129-P2  Xtr-Mir-129-P2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Chordata
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 13: 4272364-4272424 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACCAUGAUUUCGCUGCUGUUCUCUUCGGGUCUUUUUGCGGUCUGGGCUUGCUGUCUAUGACCACCCAGGAAGCCCUUACCCCAAAAAGCAUCUGCAGGGGACCCCCGCAUCAGGGAUAUUU
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Structure
        10          20        30         40        50         
ACCAUGAUUUCGCUGCU--       U     -|      C   CU      G UGUCUAU 
                   GUUCUCU CGGGU CUUUUUG GGU  GGGCUU C       G
                   CAGGGGA GUCUA GAAAAAC CCA  CCCGAA G       A
UUUAUAGGGACUACGCCCC       C     C^      C   UU      G ACCCACC 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Sp Sp Sp To
Star sequence

Tni-Mir-129-P2a_5p*
mirBase accessionNone
Sequence 
0- CUUUUUGCGGUCUGGGCUUGC -21
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Mature sequence

Tni-Mir-129-P2a_3p
mirBase accessionNone
Sequence 
39- AAGCCCUUACCCCAAAAAGCAU -61
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