MirGeneDB 3.0

MirGeneDB ID

Mmu-Mir-129-P2

Family name MIR-129 (all species)
Seed UUUUUGC
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-129-1
Paralogues Mmu-Mir-129-P1 
Orthologues Aca-Mir-129-P2  Ami-Mir-129-P2  Bta-Mir-129-P2  Cfa-Mir-129-P2  Cja-Mir-129-P2  Cli-Mir-129-P2  Cmi-Mir-129-P2  Cpi-Mir-129-P2  Cpo-Mir-129-P2  Dno-Mir-129-P2  Dre-Mir-129-P2a  Dre-Mir-129-P2b  Eca-Mir-129-P2  Ete-Mir-129-P2  Gja-Mir-129-P2  Gmo-Mir-129-P2a  Gmo-Mir-129-P2b  Hsa-Mir-129-P2  Laf-Mir-129-P2  Lch-Mir-129-P2  Loc-Mir-129-P2  Mal-Mir-129-P2a  Mal-Mir-129-P2b  Mdo-Mir-129-P2  Mml-Mir-129-P2  Mmr-Mir-129-P2  Mun-Mir-129-P2  Neu-Mir-129-P2  Oan-Mir-129-P2  Ocu-Mir-129-P2  Pab-Mir-129-P2  Pbv-Mir-129-P2  Pma-Mir-129-o2  Rno-Mir-129-P2  Sha-Mir-129-P2  Spt-Mir-129-P2  Sto-Mir-129-P2  Tgu-Mir-129-P2  Tni-Mir-129-P2a  Tni-Mir-129-P2b  Xla-Mir-129-P2c  Xla-Mir-129-P2d  Xtr-Mir-129-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Chordata
Genome context
(mm10)
chr6: 29022624-29022688 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAACCUUCCCACAGCUGUCUCCUUUGGAUCUUUUUGCGGUCUGGGCUUGCUGUUCUCUCGACAGUAGUCAGGAAGCCCUUACCCCAAAAAGUAUCUACGGGAGGCUUGGUCUACAGGGGAGACC
Get precursor sequence
Structure
        10          20        30         40        50        60 
GCAACCUUCCCACAGCU--       U     -|      C   CU      G UGUUCUCUC 
                   GUCUCCU UGGAU CUUUUUG GGU  GGGCUU C         G
                   CGGAGGG AUCUA GAAAAAC CCA  CCCGAA G         A
CCAGAGGGGACAUCUGGUU       C     U^      C   UU      G ACUGAUGAC 
   120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-129-P2_5p

mirBase accessionMIMAT0000209
Sequence
0- CUUUUUGCGGUCUGGGCUUGC -21
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Proposed targets microrna.org: MIMAT0000209
TargetScanVert: mmu-miR-129-5p
miRDB: MIMAT0000209
Star sequence

Mmu-Mir-129-P2_3p*

mirBase accessionMIMAT0016994
Sequence
43- AAGCCCUUACCCCAAAAAGUAU -65
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Proposed targets TargetScanVert: mmu-miR-129-1-3p
miRDB: MIMAT0016994