MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-24-P2

Family name MIR-24 (all species)
Seed GGCUCAG
Species Horse (Equus caballus)
MiRBase ID eca-mir-24-2
Paralogues Eca-Mir-24-P3 
Orthologues Aca-Mir-24-P2  Ami-Mir-24-P2  Bta-Mir-24-P2  Cfa-Mir-24-P2  Cja-Mir-24-P2  Cmi-Mir-24-P2  Cpi-Mir-24-P2  Cpo-Mir-24-P2  Dno-Mir-24-P2  Dre-Mir-24-P2a  Dre-Mir-24-P2b  Ete-Mir-24-P2  Gga-Mir-24-P2  Gmo-Mir-24-P2b  Hsa-Mir-24-P2  Laf-Mir-24-P2  Lch-Mir-24-P2  Loc-Mir-24-P2  Mdo-Mir-24-P2  Mml-Mir-24-P2  Mmr-Mir-24-P2  Mmu-Mir-24-P2  Mun-Mir-24-P2  Neu-Mir-24-P2  Oan-Mir-24-P2  Ocu-Mir-24-P2  Pab-Mir-24-P2  Pbv-Mir-24-P2  Rno-Mir-24-P2  Sha-Mir-24-P2  Spt-Mir-24-P2  Sto-Mir-24-P2  Tgu-Mir-24-P2  Tni-Mir-24-P2b  Xla-Mir-24-P2c  Xla-Mir-24-P2d  Xtr-Mir-24-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009170.1: 2131867-2131926 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-24-P2)		 Mir-24-P2 CM009170.1: 2131867-2131926 [-] UCSC Ensembl
Mir-27-P2 CM009170.1: 2132387-2132449 [-] UCSC Ensembl
Mir-23-P2 CM009170.1: 2132617-2132676 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUCCGGCUGUCGAUUGGACCCGCCCUCCGGUGCCUACUGAGCUGAUAUCAGUUCUCAUUUUACACACUGGCUCAGUUCAGCAGGAACAGGAGUCGAGCCCUAGAGCGAAAAGCCUUCCU
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Structure
        10        20           30        40        50          
CCUCCGGCUGUCGAUUGGACC---| CC    G  G   A         UA     UCUCAU 
                        CG  CUCC GU CCU CUGAGCUGA  UCAGU      \
                        GC  GAGG CA GGA GACUUGACU  GGUCA      U
UCCUUCCGAAAAGCGAGAUCCCGA^ U-    A  A   C         C-     CACAUU 
.       110       100         90        80         70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
-   +
Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er
Star sequence

Eca-Mir-24-P2_5p*
mirBase accessionNone
Sequence 
0- GUGCCUACUGAGCUGAUAUCAGU -23
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Mature sequence

Eca-Mir-24-P2_3p
mirBase accessionMIMAT0012987
Sequence 
38- UGGCUCAGUUCAGCAGGAACAG -60
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