MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-221-P1c

Family name MIR-221 (all species)
Seed GCUACAU
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-222b
Paralogues Gga-Mir-221-P1a  Gga-Mir-221-P2a 
Orthologues Aca-Mir-221-P1c  Ami-Mir-221-P1c  Cli-Mir-221-P1c  Cmi-Mir-221-P1c  Cpi-Mir-221-P1c  Dre-Mir-221-P1c  Gja-Mir-221-P1c  Lch-Mir-221-P1c  Loc-Mir-221-P1c  Mun-Mir-221-P1c  Oan-Mir-221-P1c  Pbv-Mir-221-P1c  Spt-Mir-221-P1c  Sto-Mir-221-P1c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Gallus_gallus.GRCg6a)		 4: 2169328-2169394 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAGCCCCGGCGGAGACACGGUGCCCUUGGCUGCUCAGUAGUCAGUGUAGGAUCUGUCCGACAGUCUCACUAACAGCUACAUCUGAUUACUGGGUCACCAAAGGACCACCACCGCGCUGCAUGGACAG
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Structure
        10        20          30        40         50        60  
AAGCCCCGGCGGAGACAC    C-  -    CU             -|    GAUCUGUCCGAC 
                  GGUG  CC UUGG  GCUCAGUAGUCAG UGUAG            A
                  CCAC  GG AACC  UGGGUCAUUAGUC ACAUC            G
GACAGGUACGUCGCGCCA    CA  A    AC             U^    GACAAUCACUCU 
     120       110       100        90        80        70
Deep sequencing
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3' NTU Yes
MotifsUGUG in loop
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-221-P1c_5p*
mirBase accessionMIMAT0025617
Sequence 
0- UGCUCAGUAGUCAGUGUAGGAUC -23
Get sequence
Proposed targets TargetScanVert: gga-miR-222b-5p
miRDB: MIMAT0025617
Mature sequence

Gga-Mir-221-P1c_3p
mirBase accessionMIMAT0025618
Sequence 
43- AGCUACAUCUGAUUACUGGGUCAC -67
Get sequence
Proposed targets TargetScanVert: gga-miR-222b-3p
miRDB: MIMAT0025618