MirGeneDB 3.0
MirGeneDB ID

Oan-Mir-221-P1c

Family name MIR-221 (all species)
Seed GCUACAU
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-222b-1
Paralogues Oan-Mir-221-P1a  Oan-Mir-221-P2a 
Orthologues Aca-Mir-221-P1c  Ami-Mir-221-P1c  Cli-Mir-221-P1c  Cmi-Mir-221-P1c  Cpi-Mir-221-P1c  Dre-Mir-221-P1c  Gga-Mir-221-P1c  Gja-Mir-221-P1c  Lch-Mir-221-P1c  Loc-Mir-221-P1c  Mun-Mir-221-P1c  Pbv-Mir-221-P1c  Spt-Mir-221-P1c  Sto-Mir-221-P1c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(mOrnAna1.p.v1_plustraces)		 NC_041733.1: 13691892-13691958 [-]
Precursor
(pre-Mir +30nt flank)
AGAAGCCAAAGAGAGUGGAUGCUAAUUGGCUGCUCAGUAGUUGGUGUAGGAUCUGUCUGACAUGAUUAAGAACAGCUACAUCUGAUUACUGGGUCACCGAUAGCAUCAACAAACUUCUGCCGAUUGG
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Structure
        10           20        30        40         50        60  
AGAAGCCAAAGAGAGUG---|      A    CU          UG -     GAUCUGUCUGAC 
                    GAUGCUA UUGG  GCUCAGUAGU  G UGUAG            A
                    CUACGAU AGCC  UGGGUCAUUA  C ACAUC            U
GGUUAGCCGUCUUCAAACAA^      -    AC          GU U     GACAAGAAUUAG 
     120       110        100        90        80        70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Br Ce He Ki Te
Star sequence

Oan-Mir-221-P1c_5p*
mirBase accessionMIMAT0007056
Sequence 
0- UGCUCAGUAGUUGGUGUAGGAUC -23
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Mature sequence

Oan-Mir-221-P1c_3p
mirBase accessionMIMAT0007057
Sequence 
43- AGCUACAUCUGAUUACUGGGUCAC -67
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