MirGeneDB 3.0
MirGeneDB ID

Mun-Mir-221-P1c

Family name MIR-221 (all species)
Seed GCUACAU
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-221-P1a  Mun-Mir-221-P2a 
Orthologues Aca-Mir-221-P1c  Ami-Mir-221-P1c  Cli-Mir-221-P1c  Cmi-Mir-221-P1c  Cpi-Mir-221-P1c  Dre-Mir-221-P1c  Gga-Mir-221-P1c  Gja-Mir-221-P1c  Lch-Mir-221-P1c  Loc-Mir-221-P1c  Oan-Mir-221-P1c  Pbv-Mir-221-P1c  Spt-Mir-221-P1c  Sto-Mir-221-P1c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Mun_miRNA_loci)		 221-P2b_LR594638.1:67393490-67393756: 101-167 [+]
Precursor
(pre-Mir +30nt flank)
CAAGACCCUUGAGAUUCGGUGUUGGCUGGCUGCUCAGUAGUCAGUGUAGGAUCUGUAUGACUUUACUAAAAACAGCUACAUCUGAUUACUGGGUCACCAGCAACAUUGUCGCACUGCUGGAGCCCUU
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Structure
        10           20        30        40         50        60  
CAAGACCCUUGAGAUUC---|      G    CU             -     GAUCUGUAUGAC 
                    GGUGUUG CUGG  GCUCAGUAGUCAG UGUAG            U
                    UUACAAC GACC  UGGGUCAUUAGUC ACAUC            U
UUCCCGAGGUCGUCACGCUG^      -    AC             U     GACAAAAAUCAU 
     120       110        100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Star sequence

Mun-Mir-221-P1c_5p* (predicted)
mirBase accessionNone
Sequence 
0- UGCUCAGUAGUCAGUGUAGGAUC -23
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Mature sequence

Mun-Mir-221-P1c_3p (predicted)
mirBase accessionNone
Sequence 
43- AGCUACAUCUGAUUACUGGGUCAC -67
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