MirGeneDB 3.0
MirGeneDB ID

Mun-Mir-221-P1a

Family name MIR-221 (all species)
Seed GCUACAU
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-221-P1c  Mun-Mir-221-P2a 
Orthologues Aca-Mir-221-P1a  Ami-Mir-221-P1a  Bta-Mir-221-P1a  Cfa-Mir-221-P1a  Cja-Mir-221-P1a1  Cja-Mir-221-P1a2  Cli-Mir-221-P1a  Cmi-Mir-221-P1a  Cpi-Mir-221-P1a  Cpo-Mir-221-P1a  Dno-Mir-221-P1a  Dre-Mir-221-P1a1  Eca-Mir-221-P1a  Ete-Mir-221-P1a  Gga-Mir-221-P1a  Gja-Mir-221-P1a  Gmo-Mir-221-P1a1  Gmo-Mir-221-P1a2  Hsa-Mir-221-P1a  Laf-Mir-221-P1a  Lch-Mir-221-P1a  Loc-Mir-221-P1a  Mal-Mir-221-P1a1  Mal-Mir-221-P1a2  Mdo-Mir-221-P1a  Mml-Mir-221-P1a  Mmr-Mir-221-P1a  Mmu-Mir-221-P1a  Neu-Mir-221-P1a  Oan-Mir-221-P1a  Ocu-Mir-221-P1a  Pab-Mir-221-P1a  Pbv-Mir-221-P1a  Rno-Mir-221-P1a  Sha-Mir-221-P1a  Spt-Mir-221-P1a  Sto-Mir-221-P1a  Tgu-Mir-221-P1a  Tni-Mir-221-P1a1  Xla-Mir-221-P1a3  Xla-Mir-221-P1a4  Xtr-Mir-221-P1a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Mun_miRNA_loci)		 221-P2a_LR594635.1:350792961-350793223: 101-163 [+]
Precursor
(pre-Mir +30nt flank)
GGAUCUUGUUUUUUUUAGUUGCCGAUCAGUCGCUCAGUAGUUGGUGUAGAUCCUGUGAUUUUAGUCAGCAGCUACAUCUGGCUACUGGGUCUCUGAAGGCAAUUACUGGUCUUCGGCUUUCAA
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Structure
        10           20        30        40         50        60
GGAUCUUGUUUUUUUUA---|     GA    UC          UG -     AUCCUGUGAU 
                    GUUGCC  UCAG  GCUCAGUAGU  G UGUAG          U
                    UAACGG  AGUC  UGGGUCAUCG  C ACAUC          U
AACUUUCGGCUUCUGGUCAU^     A-    UC          GU U     GACGACUGAU 
 120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Star sequence

Mun-Mir-221-P1a_5p* (predicted)
mirBase accessionNone
Sequence 
0- CGCUCAGUAGUUGGUGUAGAUCC -23
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Mature sequence

Mun-Mir-221-P1a_3p
mirBase accessionNone
Sequence 
39- AGCUACAUCUGGCUACUGGGUCUC -63
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