MirGeneDB 3.0
MirGeneDB ID

Pbv-Mir-221-P1c

Family name MIR-221 (all species)
Seed GCUACAU
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-222b
Paralogues Pbv-Mir-221-P1a  Pbv-Mir-221-P2a 
Orthologues Aca-Mir-221-P1c  Ami-Mir-221-P1c  Cli-Mir-221-P1c  Cmi-Mir-221-P1c  Cpi-Mir-221-P1c  Dre-Mir-221-P1c  Gga-Mir-221-P1c  Gja-Mir-221-P1c  Lch-Mir-221-P1c  Loc-Mir-221-P1c  Mun-Mir-221-P1c  Oan-Mir-221-P1c  Spt-Mir-221-P1c  Sto-Mir-221-P1c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)		 KE955174.1: 151359-151422 [+]
Precursor
(pre-Mir +30nt flank)
AAAGAACUCCAGAUCCUGAUGUGAACAGGCUGCUCAGUAGUUGGUGUAGGAUCUGUCCGAUAAAACCAACAGCUACAUCUGAUUACUGGGUCUCCUGUGGCAUCACAGCCUACUGCAAUCUUCA
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Structure
        10           20        30        40         50        60 
AAAGAACUCCAGAUCCU---|    GA     CU          UG -     GAUCUGUCCGA 
                    GAUGU  ACAGG  GCUCAGUAGU  G UGUAG           \
                    CUACG  UGUCC  UGGGUCAUUA  C ACAUC           U
ACUUCUAACGUCAUCCGACA^    G-     UC          GU U     GACAACCAAAA 
  120       110       100         90        80        70
Deep sequencing
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3' NTU Yes
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Star sequence

Pbv-Mir-221-P1c_5p*
mirBase accessionMIMAT0039035
Sequence 
0- UGCUCAGUAGUUGGUGUAGGAUC -23
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Mature sequence

Pbv-Mir-221-P1c_3p
mirBase accessionMIMAT0039036
Sequence 
40- AGCUACAUCUGAUUACUGGGUCUC -64
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