MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-221-P1c

Family name MIR-221 (all species)
Seed GCUACAU
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-221-P1a  Sto-Mir-221-P2a 
Orthologues Aca-Mir-221-P1c  Ami-Mir-221-P1c  Cli-Mir-221-P1c  Cmi-Mir-221-P1c  Cpi-Mir-221-P1c  Dre-Mir-221-P1c  Gga-Mir-221-P1c  Gja-Mir-221-P1c  Lch-Mir-221-P1c  Loc-Mir-221-P1c  Mun-Mir-221-P1c  Oan-Mir-221-P1c  Pbv-Mir-221-P1c  Spt-Mir-221-P1c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01003200.1: 196698-196761 [-]
Precursor
(pre-Mir +30nt flank)
CUAAAUGCUGGAUAAAAGAUGUUAAUCAGUUGCUCAGUAGCUAGUGUAGGAUCUGUUCCACAAUUACUACAGCUACAUCUGGUUACUGGGUCUCUGAUGACAUUAUCAAGCUACAAAGAUUGUU
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Structure
        10           20        30        40         50        60  
CUAAAUGCUGGAUAAAA---|      A    UU             -     GAU   UUCCAC 
                    GAUGUUA UCAG  GCUCAGUAGCUAG UGUAG   CUG      A
                    UUACAGU AGUC  UGGGUCAUUGGUC ACAUC   GAC      A
UUGUUAGAAACAUCGAACUA^      -    UC             U     ---   AUCAUU 
  120       110       100         90        80           70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Sto-Mir-221-P1c_5p*
mirBase accessionNone
Sequence 
0- UGCUCAGUAGCUAGUGUAGGAUCUG -25
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Mature sequence

Sto-Mir-221-P1c_3p
mirBase accessionNone
Sequence 
40- AGCUACAUCUGGUUACUGGGUCUC -64
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