MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-221-P2a

Family name MIR-221 (all species)
Seed CCUGGCA
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-221-P1a  Sto-Mir-221-P1c 
Orthologues Aca-Mir-221-P2a  Ami-Mir-221-P2a  Bta-Mir-221-P2a  Cfa-Mir-221-P2a  Cja-Mir-221-P2a  Cli-Mir-221-P2a  Cmi-Mir-221-P2a  Cpi-Mir-221-P2a  Cpo-Mir-221-P2a  Dno-Mir-221-P2a  Dre-Mir-221-P2a1  Dre-Mir-221-P2a2  Eca-Mir-221-P2a  Ete-Mir-221-P2a  Gga-Mir-221-P2a  Gja-Mir-221-P2a  Gmo-Mir-221-P2a1  Gmo-Mir-221-P2a2  Hsa-Mir-221-P2a  Laf-Mir-221-P2a  Lch-Mir-221-P2a  Loc-Mir-221-P2a  Mal-Mir-221-P2a1  Mal-Mir-221-P2a2  Mdo-Mir-221-P2a  Mml-Mir-221-P2a  Mmr-Mir-221-P2a  Mmu-Mir-221-P2a  Mun-Mir-221-P2a  Neu-Mir-221-P2a  Oan-Mir-221-P2a  Ocu-Mir-221-P2a  Pab-Mir-221-P2a  Pbv-Mir-221-P2a  Rno-Mir-221-P2a  Sha-Mir-221-P2a  Spt-Mir-221-P2a  Tgu-Mir-221-P2a  Tni-Mir-221-P2a1  Xla-Mir-221-P2a3  Xla-Mir-221-P2a4  Xtr-Mir-221-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01004609.1: 230229-230291 [+]
Precursor
(pre-Mir +30nt flank)
AUUACAUUUAUAUAUCCGGUUUGGGCCUGAACCUGGCAUACAAUGUAGAAUUCUGUGUUAGUAUACAAACAGCUACAUUGUCUGCUGGGUUUCAGGCUACCUGGAACAAUUGAAAAUCAUUUG
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Structure
        10             20        30         40        50        60  
AUUACAUUUAUAUAUCC-----|  UUG        -  UG   U         AAUU    GUUAG 
                      GGU   GGCCUGAA CC  GCA ACAAUGUAG    CUGU     U
                      CCA   UCGGACUU GG  CGU UGUUACAUC    GACA     A
GUUUACUAAAAGUUAACAAGGU^  ---        U  GU   C         ----    AACAU 
 120       110       100           90        80            70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Sto-Mir-221-P2a_5p
mirBase accessionNone
Sequence 
0- ACCUGGCAUACAAUGUAGAAUUCUGU -26
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Star sequence

Sto-Mir-221-P2a_3p*
mirBase accessionNone
Sequence 
40- AGCUACAUUGUCUGCUGGGUUUC -63
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