MirGeneDB 2.1
MirGeneDB ID

Sha-Mir-221-P2a

Family name MIR-221 (all species)
Seed GCUACAU
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID sha-mir-221
Paralogues Sha-Mir-221-P1a 
Orthologues Aca-Mir-221-P2a  Ami-Mir-221-P2a  Bta-Mir-221-P2a  Cfa-Mir-221-P2a  Cli-Mir-221-P2a  Cmi-Mir-221-P2a  Cpi-Mir-221-P2a  Cpo-Mir-221-P2a  Dno-Mir-221-P2a  Dre-Mir-221-P2a1  Dre-Mir-221-P2a2  Ete-Mir-221-P2a  Gga-Mir-221-P2a  Gja-Mir-221-P2a  Gmo-Mir-221-P2a1  Gmo-Mir-221-P2a2  Hsa-Mir-221-P2a  Lch-Mir-221-P2a  Loc-Mir-221-P2a  Mal-Mir-221-P2a1  Mal-Mir-221-P2a2  Mdo-Mir-221-P2a  Mml-Mir-221-P2a  Mmu-Mir-221-P2a  Mun-Mir-221-P2a  Oan-Mir-221-P2a  Ocu-Mir-221-P2a  Pbv-Mir-221-P2a  Rno-Mir-221-P2a  Spt-Mir-221-P2a  Sto-Mir-221-P2a  Tgu-Mir-221-P2a  Tni-Mir-221-P2a1  Xla-Mir-221-P2a3  Xla-Mir-221-P2a4  Xtr-Mir-221-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(DEVIL_add)		 GL849540.1: 1794451-1794513 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-221-P2a)		 Mir-221-P1a GL849540.1: 1793860-1793923 [+] UCSC Ensembl
Mir-221-P2a GL849540.1: 1794451-1794513 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUAGGAAGAACAUCCAGGUUUGGGGCAUGAACCUGGCAUACAAUGUAGAAUUCUGUGUUUAUUAAGUAACAGCUACAUUGUCUGCUGGGUUUCAGGCUACCUGGGAAUAUACAUCUAACUACU
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Structure
        10        20           30        40        50        60
GUAGGAAGAACAUCCAGG  UG  --  A  -|   UG   U         AAUUCUGUGUU 
                  UU  GG  GC UG AACC  GCA ACAAUGUAG           U
                  GG  CC  CG AC UUGG  CGU UGUUACAUC           A
UCAUCAAUCUACAUAUAA  GU  AU  G  U^   GU   C         GACAAUGAAUU 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-221-P2a_5p*
mirBase accessionNone
Sequence 
0- ACCUGGCAUACAAUGUAGAAUU -22
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Mature sequence

Sha-Mir-221-P2a_3p
mirBase accessionMIMAT0022797
Sequence 
40- AGCUACAUUGUCUGCUGGGUUUC -63
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