| MirGeneDB ID | Pab-Mir-221-P2a |
|---|---|
| Family name | MIR-221 (all species) |
| Seed | CCUGGCA |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | Pab-Mir-221-P1a |
| Orthologues | Aca-Mir-221-P2a Ami-Mir-221-P2a Bta-Mir-221-P2a Cfa-Mir-221-P2a Cja-Mir-221-P2a Cli-Mir-221-P2a Cmi-Mir-221-P2a Cpi-Mir-221-P2a Cpo-Mir-221-P2a Dno-Mir-221-P2a Dre-Mir-221-P2a1 Dre-Mir-221-P2a2 Eca-Mir-221-P2a Ete-Mir-221-P2a Gga-Mir-221-P2a Gja-Mir-221-P2a Gmo-Mir-221-P2a1 Gmo-Mir-221-P2a2 Hsa-Mir-221-P2a Laf-Mir-221-P2a Lch-Mir-221-P2a Loc-Mir-221-P2a Mal-Mir-221-P2a1 Mal-Mir-221-P2a2 Mdo-Mir-221-P2a Mml-Mir-221-P2a Mmr-Mir-221-P2a Mmu-Mir-221-P2a Mun-Mir-221-P2a Neu-Mir-221-P2a Oan-Mir-221-P2a Ocu-Mir-221-P2a Pbv-Mir-221-P2a Rno-Mir-221-P2a Sha-Mir-221-P2a Spt-Mir-221-P2a Sto-Mir-221-P2a Tgu-Mir-221-P2a Tni-Mir-221-P2a1 Xla-Mir-221-P2a3 Xla-Mir-221-P2a4 Xtr-Mir-221-P2a |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054702.2: 46078331-46078393 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GCAAGCUGAACAUCCAGGUCUGGGGCAUGAACCUGGCAUACAAUGUAGAUUUCUGUGUUCGUUAGGCAACAGCUACAUUGUCUGCUGGGUUUCAGGCUACCUGGAAACAUGUUCUCCAUUGGCGet precursor sequence |
| Structure | 10 20 30 40 50 60 GCAAGCUGAACAUCCAGG UG -- A -| UG U AUUU GUUCG UC GG GC UG AACC GCA ACAAUGUAG CUGU U AG CC CG AC UUGG CGU UGUUACAUC GACA U CGGUUACCUCUUGUACAA GU AU G U^ GU C ---- ACGGA 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Mature sequence | Pab-Mir-221-P2a_5p |
| mirBase accession | None |
| Sequence |
0- ACCUGGCAUACAAUGUAGAUUUCUGU -26
Get sequence
|
| Co-mature sequence | Pab-Mir-221-P2a_3p |
| mirBase accession | None |
| Sequence |
40- AGCUACAUUGUCUGCUGGGUUUC -63
Get sequence
|
