Mir-221-P2a

MirGeneDB ID

Neu-Mir-221-P2a

Family name

MIR-221 (all species)

Seed

GCUACAU

Species

Tammar Wallaby (Notamacropus eugenii)

MiRBase ID

Paralogues

Neu-Mir-221-P1a

Orthologues

Aca-Mir-221-P2a Ami-Mir-221-P2a Bta-Mir-221-P2a Cfa-Mir-221-P2a Cja-Mir-221-P2a Cli-Mir-221-P2a Cmi-Mir-221-P2a Cpi-Mir-221-P2a Cpo-Mir-221-P2a Dno-Mir-221-P2a Dre-Mir-221-P2a1 Dre-Mir-221-P2a2 Eca-Mir-221-P2a Ete-Mir-221-P2a Gga-Mir-221-P2a Gja-Mir-221-P2a Gmo-Mir-221-P2a1 Gmo-Mir-221-P2a2 Hsa-Mir-221-P2a Laf-Mir-221-P2a Lch-Mir-221-P2a Loc-Mir-221-P2a Mal-Mir-221-P2a1 Mal-Mir-221-P2a2 Mdo-Mir-221-P2a Mml-Mir-221-P2a Mmr-Mir-221-P2a Mmu-Mir-221-P2a Mun-Mir-221-P2a Oan-Mir-221-P2a Ocu-Mir-221-P2a Pab-Mir-221-P2a Pbv-Mir-221-P2a Rno-Mir-221-P2a Sha-Mir-221-P2a Spt-Mir-221-P2a Sto-Mir-221-P2a Tgu-Mir-221-P2a Tni-Mir-221-P2a1 Xla-Mir-221-P2a3 Xla-Mir-221-P2a4 Xtr-Mir-221-P2a

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(GCA_028372415.1_mMacEug1.pri)

CM051817.1: 428725175-428725237 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GUAGGGAGAGCGUCCAGGUUUGGGGCAUGAACCUGGCAUACAAUGUAGAAUUCUGUGUUUAUUAAGUAACAGCUACAUUGUCUGCUGGGUUUCAGGCUACCUGGGAAUGUACAUCCAACUACU

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Structure

        10        20           30        40        50        60
GUAGGGAGAGCGUCCAGG  UG  --  A  -|   UG   U         AAUUCUGUGUU 
                  UU  GG  GC UG AACC  GCA ACAAUGUAG           U
                  GG  CC  CG AC UUGG  CGU UGUUACAUC           A
UCAUCAACCUACAUGUAA  GU  AU  G  U^   GU   C         GACAAUGAAUU 
 120       110       100        90        80        70

Deep sequencing

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3' NTU

Motifs

Tissue expression

Br	Ce	Fi	Li	Mi	Mi	Mi	Mi	Mi	Ov	Se	Se	Te	Te	Te

Star sequence

Neu-Mir-221-P2a_5p*

mirBase accession

None

Sequence

0- ACCUGGCAUACAAUGUAGAAUU -22

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Mature sequence

Neu-Mir-221-P2a_3p

mirBase accession

None

Sequence

40- AGCUACAUUGUCUGCUGGGUUUC -63

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