MirGeneDB 2.1
MirGeneDB ID

Bta-Mir-221-P2a

Family name MIR-221 (all species)
Seed GCUACAU
Species Cow (Bos taurus)
MiRBase ID bta-mir-221
Paralogues Bta-Mir-221-P1a 
Orthologues Aca-Mir-221-P2a  Ami-Mir-221-P2a  Cfa-Mir-221-P2a  Cli-Mir-221-P2a  Cmi-Mir-221-P2a  Cpi-Mir-221-P2a  Cpo-Mir-221-P2a  Dno-Mir-221-P2a  Dre-Mir-221-P2a1  Dre-Mir-221-P2a2  Ete-Mir-221-P2a  Gga-Mir-221-P2a  Gja-Mir-221-P2a  Gmo-Mir-221-P2a1  Gmo-Mir-221-P2a2  Hsa-Mir-221-P2a  Lch-Mir-221-P2a  Loc-Mir-221-P2a  Mal-Mir-221-P2a1  Mal-Mir-221-P2a2  Mdo-Mir-221-P2a  Mml-Mir-221-P2a  Mmu-Mir-221-P2a  Mun-Mir-221-P2a  Oan-Mir-221-P2a  Ocu-Mir-221-P2a  Pbv-Mir-221-P2a  Rno-Mir-221-P2a  Sha-Mir-221-P2a  Spt-Mir-221-P2a  Sto-Mir-221-P2a  Tgu-Mir-221-P2a  Tni-Mir-221-P2a1  Xla-Mir-221-P2a3  Xla-Mir-221-P2a4  Xtr-Mir-221-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037357.1: 98126639-98126701 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-221-P2a)		 Mir-221-P1a NC_037357.1: 98125949-98126012 [+] UCSC Ensembl
Mir-221-P2a NC_037357.1: 98126639-98126701 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACAGGCCCAACAUCCAGGUCUAGGGCAUGAACCUGGCAUACAAUGUAGAUUUCUGUGUUUGUUGAGCAACAGCUACAUUGUCUGCUGGGUUUCAGGCUACCUGGAAACACGUUCUUCGUGGCU
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Structure
        10        20           30        40        50        60  
ACAGGCCCAACAUCCAGG      --  A  -|   UG   U         AUUU    GUUUG 
                  UCUAGG  GC UG AACC  GCA ACAAUGUAG    CUGU     U
                  AGGUCC  CG AC UUGG  CGU UGUUACAUC    GACA     U
UCGGUGCUUCUUGCACAA      AU  G  U^   GU   C         ----    ACGAG 
 120       110       100        90        80            70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Star sequence

Bta-Mir-221-P2a_5p*
mirBase accessionNone
Sequence 
0- ACCUGGCAUACAAUGUAGAUUUCUGU -26
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Mature sequence

Bta-Mir-221-P2a_3p
mirBase accessionMIMAT0003529
Sequence 
40- AGCUACAUUGUCUGCUGGGUUUC -63
Get sequence
Proposed targets TargetScanVert: bta-miR-221