MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-221-P1c

Family name MIR-221 (all species)
Seed GCUACAU
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-221-P1a  Cmi-Mir-221-P2a 
Orthologues Aca-Mir-221-P1c  Ami-Mir-221-P1c  Cli-Mir-221-P1c  Cpi-Mir-221-P1c  Dre-Mir-221-P1c  Gga-Mir-221-P1c  Gja-Mir-221-P1c  Lch-Mir-221-P1c  Loc-Mir-221-P1c  Mun-Mir-221-P1c  Oan-Mir-221-P1c  Pbv-Mir-221-P1c  Spt-Mir-221-P1c  Sto-Mir-221-P1c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635856.1: 1950754-1950817 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGGACACUGGAGGAAGGGUGUUGAUCGGGUGCUCAGUAGCUAGUGUAGGAUCUGUUUUGUCAUUUCUACAGCUACAUCUGGUUACUGGGUCUCUGAUCACAUCCCUAAGCGACUAAAGCUACU
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Structure
        10           20        30        40         50        60  
CUGGACACUGGAGGAAG---|    U      GU             -     GAU    UUUGU 
                    GGUGU GAUCGG  GCUCAGUAGCUAG UGUAG   CUGU     C
                    CUACA CUAGUC  UGGGUCAUUGGUC ACAUC   GACA     A
UCAUCGAAAUCAGCGAAUCC^    -      UC             U     ---    UCUUU 
  120       110       100         90        80           70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Star sequence

Cmi-Mir-221-P1c_5p*
mirBase accessionNone
Sequence 
0- UGCUCAGUAGCUAGUGUAGGAUCUGU -26
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Mature sequence

Cmi-Mir-221-P1c_3p
mirBase accessionNone
Sequence 
40- AGCUACAUCUGGUUACUGGGUCUC -64
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