MirGeneDB 3.0
MirGeneDB ID

Lan-Mir-1989-P1

Family name MIR-1989 (all species)
Seed CAGCUGU
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues Lan-Mir-1989-P2  Lan-Mir-1989-P3 
Orthologues Agr-Mir-1989  Cte-Mir-1989  Lgi-Mir-1989  Llo-Mir-1989  Mgi-Mir-1989  Mom-Mir-1989  Npo-Mir-1989  Ofu-Mir-1989  Pau-Mir-1989  Pcr-Mir-1989  Pve-Mir-1989  Rph-Mir-1989  Sma-Mir-1989  Sme-Mir-1989  Snu-Mir-1989 
Node of Origin (locus) L. anatina
Node of Origin (family) Platytrochozoa
Genome context
(LinAna_1.0)		 LFEI01000019: 478556-478612 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAUGGAUGCCAUAGUAACCUUUUUGCUGUGUCAGCUGUCAUGAUGCCUUCUUGAAGCUCUACAAAGAAGACGUGAUGGCAUCUGGCCCAGCGAAGAGAGGAAGAGCAGCAGCACCAG
Get precursor sequence
Structure
        10          20        30        40        50        
AAUGGAUGCCAUAGUAAC--|         U     C      G   C      GAAGC 
                    CUUUUUGCUG GUCAG UGUCAU AUG CUUCUU     \
                    GAGAAGCGAC CGGUC ACGGUA UGC GAAGAA     U
GACCACGACGACGAGAAGGA^         C     U      G   A      ACAUC 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsNo
Tissue expression
-   +
To To
Mature sequence

Lan-Mir-1989-P1_5p
mirBase accessionNone
Sequence 
0- UCAGCUGUCAUGAUGCCUUCUU -22
Get sequence
Star sequence

Lan-Mir-1989-P1_3p* (predicted)
mirBase accessionNone
Sequence 
35- GAAGACGUGAUGGCAUCUGGCC -57
Get sequence