MirGeneDB 3.0
MirGeneDB ID

Llo-Mir-1989

Family name MIR-1989 (all species)
Seed CAGCUGU
Species Bootlace worm (Lineus longissimus)
MiRBase ID
Paralogues
Orthologues Agr-Mir-1989  Cte-Mir-1989  Hru-Mir-1989-P4a  Hru-Mir-1989-P4b  Lan-Mir-1989-P1  Lan-Mir-1989-P2  Lan-Mir-1989-P3  Lgi-Mir-1989  Mgi-Mir-1989  Mom-Mir-1989  Npo-Mir-1989  Ofu-Mir-1989  Pau-Mir-1989  Pcr-Mir-1989  Pdu-Mir-1989-P5  Pdu-Mir-1989-P6  Pdu-Mir-1989-P7  Pdu-Mir-1989-P8  Pdu-Mir-1989-P9  Pdu-Mir-1989-P10  Pve-Mir-1989  Rph-Mir-1989  Sma-Mir-1989  Sme-Mir-1989  Snu-Mir-1989 
Node of Origin (locus) Platytrochozoa
Node of Origin (family) Platytrochozoa
Genome context
(GCA_910592395.2_tnLinLong1)		 OU342999.1: 4092671-4092723 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AUCCCCGAGAAACUUUCACUCCUCAGCAGUUCAGCUGUGACGAUGCCUUCUUAGGUCAUAAGCAGCCAUUGUUGUAGUUGGUCUUCAGAGGGGUAGUUGAAGGAUUUGAACAG
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Structure
        10          20        30        40        50      
AUCCCCGAGAAACUUUC--|      AGC  UU      UG      C  U   AGG 
                   ACUCCUC   AG  CAGCUG  ACGAUG CU CUU   \
                   UGGGGAG   UC  GUUGAU  UGUUAC GA GAA   U
GACAAGUUUAGGAAGUUGA^      ACU  UG      GU      C  C   UAC 
 110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
No No No No No No
Mature sequence

Llo-Mir-1989_5p
mirBase accessionNone
Sequence 
0- UCAGCUGUGACGAUGCCUUCUU -22
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Star sequence

Llo-Mir-1989_3p* (predicted)
mirBase accessionNone
Sequence 
31- GCAGCCAUUGUUGUAGUUGGUC -53
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