MirGeneDB 3.0

MirGeneDB ID

Mom-Mir-1989

Family name MIR-1989 (all species)
Seed CAGCUGU
Species Mossy chiton (Mopalia muscosa)
MiRBase ID
Paralogues
Orthologues Agr-Mir-1989  Cte-Mir-1989  Hru-Mir-1989-P4a  Hru-Mir-1989-P4b  Lan-Mir-1989-P1  Lan-Mir-1989-P2  Lan-Mir-1989-P3  Lgi-Mir-1989  Llo-Mir-1989  Mgi-Mir-1989  Npo-Mir-1989  Ofu-Mir-1989  Pau-Mir-1989  Pcr-Mir-1989  Pdu-Mir-1989-P5  Pdu-Mir-1989-P6  Pdu-Mir-1989-P7  Pdu-Mir-1989-P8  Pdu-Mir-1989-P9  Pdu-Mir-1989-P10  Pve-Mir-1989  Rph-Mir-1989  Sma-Mir-1989  Sme-Mir-1989  Snu-Mir-1989 
Node of Origin (locus) Platytrochozoa
Node of Origin (family) Platytrochozoa
Genome context
(GCA_031763545.1_ASM3176354v1_genomic_Mom)
JARFOD010135403.1: 12199-12255 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAAGUUGUGGAAUAAAGUGGUUUUGCUGGACAGCUGUCUCGAUGCCUUCUUUUGCUUAAAAAGAGAAGUCAUUCUGACUGCUAAUCAACAGAACCAUAUUGACACAUAUCAAAAGU
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Structure
        10          20        30        40        50        
AAAAGUUGUGGAAUAAA--|        C   AC   U   UC    C      UUGCU 
                   GUGGUUUUG UGG  AGC GUC  GAUG CUUCUU     \
                   UACCAAGAC ACU  UCG CAG  UUAC GAAGAG     U
UGAAAACUAUACACAGUUA^        A   AA   U   UC    U      AAAAA 
     110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
 +
To
Mature sequence

Mom-Mir-1989_5p

mirBase accessionNone
Sequence
0- ACAGCUGUCUCGAUGCCUUCUU -22
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Star sequence

Mom-Mir-1989_3p* (predicted)

mirBase accessionNone
Sequence
35- GAAGUCAUUCUGACUGCUAAUC -57
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