MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-26-P1a

Family name MIR-26 (all species)
Seed UCAAGUA
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID
Paralogues Tni-Mir-26-P1b  Tni-Mir-26-P2b  Tni-Mir-26-P4 
Orthologues Aca-Mir-26-P1  Ami-Mir-26-P1  Bta-Mir-26-P1  Cfa-Mir-26-P1  Cja-Mir-26-P1  Cli-Mir-26-P1  Cmi-Mir-26-P1  Cpi-Mir-26-P1  Cpo-Mir-26-P1  Dno-Mir-26-P1  Dre-Mir-26-P1a  Eca-Mir-26-P1  Ete-Mir-26-P1  Gga-Mir-26-P1  Gja-Mir-26-P1  Gmo-Mir-26-P1a  Hsa-Mir-26-P1  Laf-Mir-26-P1  Lch-Mir-26-P1  Loc-Mir-26-P1  Mal-Mir-26-P1a  Mdo-Mir-26-P1  Mml-Mir-26-P1  Mmr-Mir-26-P1  Mmu-Mir-26-P1  Mun-Mir-26-P1  Neu-Mir-26-P1  Oan-Mir-26-P1  Ocu-Mir-26-P1  Pab-Mir-26-P1  Pbv-Mir-26-P1  Pma-Mir-26-o1  Rno-Mir-26-P1  Sha-Mir-26-P1  Spt-Mir-26-P1  Sto-Mir-26-P1  Tgu-Mir-26-P1  Xtr-Mir-26-P1 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 6: 4014119-4014177 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGUUGGAAGCAGAAGUAGCCGUAACUGGGUUCAAGUAAUCCAGGAUAGGCUUGGUAUCUGUCUCGGCCUAUGCUUGAUUACUUGCACUUGGAGACGGCGACGUAACCACGGCAACCUG
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Structure
        10          20        30        40        50         
CUGUUGGAAGCAGAAGUA--|    AA UG   U         C  G       UGGUAU 
                    GCCGU  C  GGU CAAGUAAUC AG AUAGGCU      \
                    CGGCA  G  UCA GUUCAUUAG UC UAUCCGG      C
GUCCAACGGCACCAAUGCAG^    GA GU   C         U  G       CUCUGU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sp Sp Sp To
Mature sequence

Tni-Mir-26-P1a_5p
mirBase accessionNone
Sequence 
0- UUCAAGUAAUCCAGGAUAGGCU -22
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Star sequence

Tni-Mir-26-P1a_3p*
mirBase accessionNone
Sequence 
37- CCUAUGCUUGAUUACUUGCACU -59
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