MirGeneDB 2.1

MirGeneDB ID

Dre-Mir-26-P1a

Family name MIR-26 (all species)
Seed UCAAGUA
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-26a-3
Paralogues Dre-Mir-26-P1b  Dre-Mir-26-P2a  Dre-Mir-26-P4 
Orthologues Aca-Mir-26-P1  Ami-Mir-26-P1  Bta-Mir-26-P1  Cfa-Mir-26-P1  Cli-Mir-26-P1  Cmi-Mir-26-P1  Cpi-Mir-26-P1  Cpo-Mir-26-P1  Dno-Mir-26-P1  Ete-Mir-26-P1  Gga-Mir-26-P1  Gja-Mir-26-P1  Gmo-Mir-26-P1a  Hsa-Mir-26-P1  Lch-Mir-26-P1  Loc-Mir-26-P1  Mal-Mir-26-P1a  Mdo-Mir-26-P1  Mml-Mir-26-P1  Mmu-Mir-26-P1  Mun-Mir-26-P1  Oan-Mir-26-P1  Ocu-Mir-26-P1  Pbv-Mir-26-P1  Pma-Mir-26-o1  Rno-Mir-26-P1  Sha-Mir-26-P1  Spt-Mir-26-P1  Sto-Mir-26-P1  Tgu-Mir-26-P1  Tni-Mir-26-P1a  Xtr-Mir-26-P1 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(danRer11)
chr24: 20470992-20471052 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUACUGAGUCAGUGUGUGGCUGCAACCUGGUUCAAGUAAUCCAGGAUAGGCUUUGUGGACUAGGGUUGGCCUGUUCUUGGUUACUUGCACUGGGUUGCAGCUACUAAACAACUAAGAAGAU
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Structure
        10          20        30        40        50          
AUACUGAGUCAGUGUGU--|         UG  U         C          UUGUGGA 
                   GGCUGCAACC  GU CAAGUAAUC AGGAUAGGCU       \
                   UCGACGUUGG  CA GUUCAUUGG UCUUGUCCGG       C
UAGAAGAAUCAACAAAUCA^         GU  C         U          UUGGGAU 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-26-P1a_5p

mirBase accessionMIMAT0001794
Sequence
0- UUCAAGUAAUCCAGGAUAGGCU -22
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Proposed targets TargetScanFish: dre-miR-26a
Star sequence

Dre-Mir-26-P1a_3p*

mirBase accessionNone
Sequence
39- CCUGUUCUUGGUUACUUGCACU -61
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