MirGeneDB 3.0
MirGeneDB ID

Mdo-Mir-26-P1

Family name MIR-26 (all species)
Seed UCAAGUA
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-26-3
Paralogues Mdo-Mir-26-P2  Mdo-Mir-26-P4 
Orthologues Aca-Mir-26-P1  Ami-Mir-26-P1  Bta-Mir-26-P1  Cfa-Mir-26-P1  Cja-Mir-26-P1  Cli-Mir-26-P1  Cmi-Mir-26-P1  Cpi-Mir-26-P1  Cpo-Mir-26-P1  Dno-Mir-26-P1  Dre-Mir-26-P1a  Dre-Mir-26-P1b  Eca-Mir-26-P1  Ete-Mir-26-P1  Gga-Mir-26-P1  Gja-Mir-26-P1  Gmo-Mir-26-P1a  Gmo-Mir-26-P1b  Hsa-Mir-26-P1  Laf-Mir-26-P1  Lch-Mir-26-P1  Loc-Mir-26-P1  Mal-Mir-26-P1a  Mal-Mir-26-P1b  Mml-Mir-26-P1  Mmr-Mir-26-P1  Mmu-Mir-26-P1  Mun-Mir-26-P1  Neu-Mir-26-P1  Oan-Mir-26-P1  Ocu-Mir-26-P1  Pab-Mir-26-P1  Pbv-Mir-26-P1  Pma-Mir-26-o1  Rno-Mir-26-P1  Sha-Mir-26-P1  Spt-Mir-26-P1  Sto-Mir-26-P1  Tgu-Mir-26-P1  Tni-Mir-26-P1a  Tni-Mir-26-P1b  Xla-Mir-26-P1c  Xla-Mir-26-P1d  Xtr-Mir-26-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(monDom5_add)		 Un: 48296701-48296761 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGCCUCUCCUGGAAAAGGCUGUGACCUGGUUCAAGUAAUCCAGGAUAGGCUGGACCCAUUCUCAUCGGCCUAUUCUCGACUACUUGCACUCGGGCGCGGCCACGCGAAGCGCAGCGACGG
Get precursor sequence
Structure
        10          20         30        40        50          
AGGCCUCUCCUGGAAAA--|      A    -  U      A  C          GGACCCA 
                   GGCUGUG CCUG GU CAAGUA UC AGGAUAGGCU       \
                   CCGGCGC GGGC CA GUUCAU AG UCUUAUCCGG       U
GGCAGCGACGCGAAGCGCA^      -    U  C      C  C          CUACUCU 
 .       110       100         90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Br Ce He Ki Te
Mature sequence

Mdo-Mir-26-P1_5p
mirBase accessionMIMAT0012736
Sequence 
0- UUCAAGUAAUCCAGGAUAGGCU -22
Get sequence
Proposed targets TargetScanVert: mdo-miR-26-5p
Star sequence

Mdo-Mir-26-P1_3p*
mirBase accessionMIMAT0031030
Sequence 
39- CCUAUUCUCGACUACUUGCACU -61
Get sequence
Proposed targets TargetScanVert: mdo-miR-26-3-3p