MirGeneDB 3.0
22 microRNA genes with seed AGGCAGC
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Aca-Mir-1788 aca-mir-1788 MIR-1788 AGGCAGC MIMAT0021805 MIMAT0021806 1 87812135 87812194 - Vertebrata Vertebrata Yes 1
Ami-Mir-1788 ami-mir-1788 MIR-1788 GCUUGUU MIMAT0038325 MIMAT0038326 NW_017709636.1 31513 31572 - Vertebrata Vertebrata Yes 1
Cli-Mir-1788 cli-mir-1788 MIR-1788 AGGCAGC MIMAT0038700 MIMAT0038701 scaffold32 1391518 1391576 - Vertebrata Vertebrata Yes 1
Cpi-Mir-1788 cpi-mir-1788 MIR-1788 GCUUGUU MIMAT0037936 MIMAT0037937 JH587013 13349 13407 + Vertebrata Vertebrata Yes 1
Dre-Mir-1788 dre-mir-1788 MIR-1788 GCUUGUU MIMAT0011294 MIMAT0011295 chr9 11551626 11551682 - Vertebrata Vertebrata Yes 1 1
Ebu-Mir-1788 None MIR-1788 AGGCAGC None None FYBX02009973.1 681487 681541 + Vertebrata Vertebrata Yes 1
Gga-Mir-1788 gga-mir-1788 MIR-1788 GCUUGUU MIMAT0007700 MIMAT0007701 7 22354033 22354091 + Vertebrata Vertebrata Yes 1 1
Gja-Mir-1788 None MIR-1788 AGGCAGC None None NW_015168675.1 535117 535175 + Vertebrata Vertebrata Yes 1
Gmo-Mir-1788 gmo-mir-1788 MIR-1788 AGGCAGC MIMAT0044124 MIMAT0044125 GeneScaffold_1550 212983 213039 - Vertebrata Vertebrata Yes 1
Lch-Mir-1788 None MIR-1788 AGGCAGC None None JH126836.1 982506 982564 - Vertebrata Vertebrata Unknown
Loc-Mir-1788 None MIR-1788 AGGCAGC None None LG12 11014479 11014536 - Vertebrata Vertebrata Yes 1
Mal-Mir-1788 None MIR-1788 AGGCAGC None None KV884776.1 34824 34881 + Vertebrata Vertebrata Unknown 1
Mun-Mir-1788 None MIR-1788 AGGCAGC None None 1788_LR594638.1:304605141-304605283 43 101 - Vertebrata Vertebrata No 1
Pbv-Mir-1788 pbv-mir-1788 MIR-1788 AGGCAGC MIMAT0039085 MIMAT0039086 KE952971.1 1064609 1064667 - Vertebrata Vertebrata Yes 1
Pma-Mir-1788 pma-mir-1788a MIR-1788 GCUUGUU MIMAT0019561 MIMAT0019562 NC_046070.1 17174897 17174957 + Vertebrata Vertebrata Yes
Spt-Mir-1788 None MIR-1788 AGGCAGC None None QEPC01014018.1 10535 10593 - Vertebrata Vertebrata Unknown
Sto-Mir-1788 None MIR-1788 AGGCAGC None None BFAA01085147.1 745 807 + Vertebrata Vertebrata Unknown 1
Tgu-Mir-1788 tgu-mir-1788 MIR-1788 AGGCAGC MIMAT0025407 None 7 10133597 10133655 - Vertebrata Vertebrata Unknown 1
Xtr-Mir-1788 None MIR-1788 AGGCAGC None None chr9 77516409 77516467 - Vertebrata Vertebrata Yes 1
Xla-Mir-1788-P1 None MIR-1788 AGGCAGC None None NC_030740.1 52411780 52411838 + X. laevis Vertebrata Yes 1
Xla-Mir-1788-P2 None MIR-1788 AGGCAGC None None NC_030741.1 47696710 47696768 + X. laevis Vertebrata Yes 1
Cin-Novel-1 None CIN-NOVEL-1 AGGCAGC None None HT001221.1 6546 6600 - C. intestinalis C. intestinalis No 1

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