MirGeneDB 3.0
MirGeneDB ID

Mun-Mir-1788

Family name MIR-1788 (all species)
Seed AGGCAGC
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues
Orthologues Aca-Mir-1788  Ami-Mir-1788  Cli-Mir-1788  Cmi-Mir-1788  Cpi-Mir-1788  Dre-Mir-1788  Ebu-Mir-1788  Gga-Mir-1788  Gja-Mir-1788  Gmo-Mir-1788  Lch-Mir-1788  Loc-Mir-1788  Mal-Mir-1788  Pbv-Mir-1788  Pma-Mir-1788  Spt-Mir-1788  Sto-Mir-1788  Tgu-Mir-1788  Tni-Mir-1788  Xla-Mir-1788-P1  Xla-Mir-1788-P2  Xtr-Mir-1788 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(Mun_miRNA_loci)		 1788_LR594638.1:304605141-304605283: 43-101 [-]
Precursor
(pre-Mir +30nt flank)
CUGGACCUCUUUUGACUCUUUUGGGUUCUUGGCUUGUUUUAAGUUGCCUGUGGACAAUUAGCAGAACUCAGGCAGCUAAAGCAAGUCUGGAAAUCAUGAGCAACUGCAUCGUGGUUUUU
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Structure
        10          20        30        40        50         
CUGGACCUCUUUUGACU--|  U  GG    U           A        UGGACAAU 
                   CUU UG  UUCU GGCUUGUUUUA GUUGCCUG        U
                   GAG AC  AAGG CUGAACGAAAU CGACGGAC        A
UUUUUGGUGCUACGUCAAC^  U  UA    U           -        UCAAGACG 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Mun-Mir-1788_5p*
mirBase accessionNone
Sequence 
0- GGCUUGUUUUAAGUUGCCUGUG -22
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Mature sequence

Mun-Mir-1788_3p
mirBase accessionNone
Sequence 
38- CAGGCAGCUAAAGCAAGUCUG -59
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