MirGeneDB 2.1
MirGeneDB ID

Dno-Mir-145

Family name MIR-145 (all species)
Seed UCCAGUU
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-145  Ami-Mir-145  Bta-Mir-145  Cfa-Mir-145  Cli-Mir-145  Cmi-Mir-145  Cpi-Mir-145  Cpo-Mir-145  Dre-Mir-145  Ebu-Mir-145  Ete-Mir-145  Gga-Mir-145  Gja-Mir-145  Gmo-Mir-145  Hsa-Mir-145  Lch-Mir-145  Loc-Mir-145  Mal-Mir-145  Mdo-Mir-145  Mml-Mir-145  Mmu-Mir-145  Mun-Mir-145  Oan-Mir-145  Ocu-Mir-145  Pbv-Mir-145  Pma-Mir-145  Rno-Mir-145  Sha-Mir-145  Spt-Mir-145  Sto-Mir-145  Tgu-Mir-145  Xla-Mir-145-P1  Xla-Mir-145-P2  Xtr-Mir-145 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(dasNov3)		 572593378_name_G734P622317FC1_T0_mate_572586928: 772-829 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAGGCCGGGCUCCCCCACCGUGUCCUCACGGUCCAGUUUUCCCAGGAAUCCUUAGAUGCUAAGAUGGGGAUUCCUGGAAAUACUGUCUUGAGGUCACGGUUUAACGGCUGGACUCGCC
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Structure
        10          20        30        40        50         
AAGGCCGGGCUCCCCCA--|    U     C  UC    U  C           UAGAUG 
                   CCGUG CCUCA GG  CAGU UU CCAGGAAUCCU      C
                   GGCAC GGAGU UC  GUCA AA GGUCCUUAGGG      U
CCGCUCAGGUCGGCAAUUU^    U     -  U-    U  A           GUAGAA 
      110       100        90          80        70        60
Deep sequencing
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CommentAlthough there is a templated T at the 3' end of the 3p arm, this transcript is annotated as a Group 2 miRNA given the CAGE data in human and the 5' starting cut of 3' offset reads in various vertebrate taxa. Note that there is a polymorphic indel at both ends of the pre and thus the reads are adjusted to the precursor sequence that was found in the trace archive.
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Dno-Mir-145_5p
mirBase accessionNone
Sequence 
0- GUCCAGUUUUCCCAGGAAUCCU -22
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Star sequence

Dno-Mir-145_3p*
mirBase accessionNone
Sequence 
38- GAUUCCUGGAAAUACUGUCU -58
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