MirGeneDB ID | Mmr-Mir-145 |
Family name |
MIR-145 (all species) |
Seed |
UUGUUCU |
Species |
Gray mouse lemur (Microcebus murinus) |
MiRBase ID |
mmr-mir-145
|
Paralogues |
|
Orthologues |
Aca-Mir-145
Ami-Mir-145
Bta-Mir-145
Cfa-Mir-145
Cja-Mir-145
Cli-Mir-145
Cmi-Mir-145
Cpi-Mir-145
Cpo-Mir-145
Dno-Mir-145
Dre-Mir-145
Ebu-Mir-145
Eca-Mir-145
Ete-Mir-145
Gga-Mir-145
Gja-Mir-145
Gmo-Mir-145
Hsa-Mir-145
Laf-Mir-145
Lch-Mir-145
Loc-Mir-145
Mal-Mir-145
Mdo-Mir-145
Mml-Mir-145
Mmu-Mir-145
Mun-Mir-145
Neu-Mir-145
Oan-Mir-145
Ocu-Mir-145
Pab-Mir-145
Pbv-Mir-145
Pma-Mir-145
Rno-Mir-145
Sha-Mir-145
Spt-Mir-145
Sto-Mir-145
Tgu-Mir-145
Xla-Mir-145-P1
Xla-Mir-145-P2
Xtr-Mir-145
|
Node of Origin (locus) |
Vertebrata
|
Node of Origin (family) |
Vertebrata
|
Genome context (GCA_000165445.3_Mmur_3.0_genomic) |
CM007661.1: 76526375-76526433 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CAAGAUCCCCAAGUGCUGCCCCUGACUGAAUCCAGAUUUCACAGAACAAAUCCCUUUAUUAAAAGGAUUUGUUCUGUAAAAUCUGGAUUCAGUCAAAAGCCCUCACUCAAGGAUCCAGA
Get precursor sequence
|
Structure | 10 20 30 40 50
CAAGAUCCCCAAGUGCU--| CCC C CCCUUUA
GC UGACUGAAUCCAGAUUU ACAGAACAAAU \
CG ACUGACUUAGGUCUAAA UGUCUUGUUUA U
AGACCUAGGAACUCACUCC^ AAA A GGAAAAU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | UG at 5p(-14) |
Tissue expression
|
|
Star sequence |
Mmr-Mir-145_5p* |
mirBase accession | MIMAT0049208 |
Sequence |
0- UCCAGAUUUCACAGAACAAAU -21
Get sequence
|
Mature sequence |
Mmr-Mir-145_3p |
mirBase accession | None |
Sequence |
37- UUUGUUCUGUAAAAUCUGGAUU -59
Get sequence
|