MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-130-P3a1

Family name MIR-130 (all species)
Seed AGUGCAA
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-130-P1a1  Mal-Mir-130-P1a2  Mal-Mir-130-P2a1  Mal-Mir-130-P2a2  Mal-Mir-130-P2b2  Mal-Mir-130-P4a1 
Orthologues Aca-Mir-130-P3a  Ami-Mir-130-P3a  Cli-Mir-130-P3a  Cmi-Mir-130-P3a  Cpi-Mir-130-P3a  Dre-Mir-130-P3a1  Gga-Mir-130-P3a  Gja-Mir-130-P3a  Lch-Mir-130-P3a  Loc-Mir-130-P3a  Mun-Mir-130-P3a  Pbv-Mir-130-P3a  Spt-Mir-130-P3a  Sto-Mir-130-P3a  Tgu-Mir-130-P3a  Xtr-Mir-130-P3a 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884728.1: 4812018-4812084 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGUGCCGUCUGCGUCACCUUGCAGACAAGACCCUAUCAAUAUUGCCUCUGCUUUCACUAGAUUUAACAGAGUAGUGCAAUAUUGCUUAUAGGGUCUUGACUCUGAGGGAUGGUCUUCCUCCAGUGG
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Structure
        10         20          30           40        50        60  
CUGUGCCGUCUGCGUCA-    G    --           ---|        CU     UUCACUAG 
                  CCUU CAGA  CAAGACCCUAU   CAAUAUUGC  CUGCU        \
                  GGGA GUCU  GUUCUGGGAUA   GUUAUAACG  GAUGA        A
GGUGACCUCCUUCUGGUA    -    CA           UUC^        U-     GACAAUUU 
     120       110        100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-130-P3a1_5p*
mirBase accessionNone
Sequence 
0- ACCCUAUCAAUAUUGCCUCUGCU -23
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Mature sequence

Mal-Mir-130-P3a1_3p
mirBase accessionNone
Sequence 
42- UAGUGCAAUAUUGCUUAUAGGGUCU -67
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