MirGeneDB 2.1
MirGeneDB ID

Mal-Mir-130-P2a2

Family name MIR-130 (all species)
Seed AGUGCAA
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-130-P1a1  Mal-Mir-130-P1a2  Mal-Mir-130-P2a1  Mal-Mir-130-P2b2  Mal-Mir-130-P3a1  Mal-Mir-130-P4a1 
Orthologues Aca-Mir-130-P2a  Ami-Mir-130-P2a  Bta-Mir-130-P2a  Cfa-Mir-130-P2a  Cli-Mir-130-P2a  Cmi-Mir-130-P2a  Cpi-Mir-130-P2a  Cpo-Mir-130-P2a  Dno-Mir-130-P2a  Dre-Mir-130-P2a2  Gga-Mir-130-P2a  Gja-Mir-130-P2a  Gmo-Mir-130-P2a2  Hsa-Mir-130-P2a  Lch-Mir-130-P2a  Loc-Mir-130-P2a  Mml-Mir-130-P2a  Mmu-Mir-130-P2a  Mun-Mir-130-P2a  Oan-Mir-130-P2a  Ocu-Mir-130-P2a  Pbv-Mir-130-P2a  Rno-Mir-130-P2a  Spt-Mir-130-P2a  Sto-Mir-130-P2a  Tgu-Mir-130-P2a  Tni-Mir-130-P2a2  Xtr-Mir-130-P2a 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884763.1: 518814-518876 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCCACCUGCUGACACGUGCUGAGGUCAGCUGCUUUGACAAUGUUGCACUACUGUACCAUCCAUUCUAGCAGUGCAAUAGUAUUGUCAUAGCAUUUGGCCCCAGCUCCCUCUGUACGGGUGCUA
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Structure
        10          20        30        40           50         
UCCACCUGCUGACACGU--    A      C    U       ---|       A  GUACCA 
                   GCUG GGUCAG UGCU UGACAAU   GUUGCACU CU      U
                   CGAC CCGGUU ACGA ACUGUUA   UAACGUGA GA      C
AUCGUGGGCAUGUCUCCCU    C      U    U       UGA^       C  UCUUAC 
 120       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-130-P2a2_5p*
mirBase accessionNone
Sequence 
0- GCUUUGACAAUGUUGCACUACU -22
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Mature sequence

Mal-Mir-130-P2a2_3p
mirBase accessionNone
Sequence 
38- CAGUGCAAUAGUAUUGUCAUAGCAU -63
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