MirGeneDB 3.0
MirGeneDB ID

Pbv-Mir-130-P3a

Family name MIR-130 (all species)
Seed AGUGCAA
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-454
Paralogues Pbv-Mir-130-P1a  Pbv-Mir-130-P1b  Pbv-Mir-130-P1c  Pbv-Mir-130-P2a  Pbv-Mir-130-P2b  Pbv-Mir-130-P4a 
Orthologues Aca-Mir-130-P3a  Ami-Mir-130-P3a  Cli-Mir-130-P3a  Cmi-Mir-130-P3a  Cpi-Mir-130-P3a  Dre-Mir-130-P3a1  Gga-Mir-130-P3a  Gja-Mir-130-P3a  Lch-Mir-130-P3a  Loc-Mir-130-P3a  Mal-Mir-130-P3a1  Mun-Mir-130-P3a  Spt-Mir-130-P3a  Sto-Mir-130-P3a  Tgu-Mir-130-P3a  Xla-Mir-130-P3a3  Xla-Mir-130-P3a4  Xtr-Mir-130-P3a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)		 KE953167.1: 505152-505216 [+]
Clustered miRNAs
(< 50kb from Mir-130-P3a)		 Mir-130-P1a KE953167.1: 486603-486663 [+]
Mir-130-P2a KE953167.1: 488663-488725 [+]
Mir-130-P3a KE953167.1: 505152-505216 [+]
Mir-130-P4a KE953167.1: 507030-507091 [+]
Precursor
(pre-Mir +30nt flank)
GAAAUGGUGCGUGAGAACUCUGAGGAUAAAACCCUAUCAAUAUUGCCUCUGCUUCUUCACUCGGUCUUAGUAGUGCAAUAUUGCUAAUAGGGUCUUUUCUUUGGGGUUACAGACUUCGUGGGAAA
Get precursor sequence
Structure
        10          20        30           40        50        60 
GAAAUGGUGCGUGAGAA--   UG    U  A       ---|        CU     UCUUCAC 
                   CUC  AGGA AA ACCCUAU   CAAUAUUGC  CUGCU       \
                   GGG  UUCU UU UGGGAUA   GUUAUAACG  GAUGA       U
AAAGGGUGCUUCAGACAUU   GU    U  C       AUC^        U-     UUCUGGC 
   120       110       100        90        80         70
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Star sequence

Pbv-Mir-130-P3a_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACCCUAUCAAUAUUGCCUCUGCU -23
Get sequence
Mature sequence

Pbv-Mir-130-P3a_3p (predicted)
mirBase accessionMIMAT0039056
Sequence 
40- UAGUGCAAUAUUGCUAAUAGGGUCU -65
Get sequence