MirGeneDB 3.0
MirGeneDB ID

Loc-Mir-130-P3a

Family name MIR-130 (all species)
Seed AGUGCAA
Species Spotted gar (Lepisosteus oculatus)
MiRBase ID
Paralogues Loc-Mir-130-P1a  Loc-Mir-130-P1b  Loc-Mir-130-P2a  Loc-Mir-130-P2b  Loc-Mir-130-P4a 
Orthologues Aca-Mir-130-P3a  Ami-Mir-130-P3a  Cli-Mir-130-P3a  Cmi-Mir-130-P3a  Cpi-Mir-130-P3a  Dre-Mir-130-P3a1  Gga-Mir-130-P3a  Gja-Mir-130-P3a  Lch-Mir-130-P3a  Mal-Mir-130-P3a1  Mun-Mir-130-P3a  Pbv-Mir-130-P3a  Spt-Mir-130-P3a  Sto-Mir-130-P3a  Tgu-Mir-130-P3a  Xla-Mir-130-P3a3  Xla-Mir-130-P3a4  Xtr-Mir-130-P3a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(LepOcu1)		 LG20: 1574095-1574160 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AGCAUAACCACGAUCCACCUUCUAGACGAGACCCUAUCAAUAUUGCCUCUGCUUUUUGUGCAUAUGUGGAGUAGUGCAAUAUUGCUUAUAGGGUCUUGGUUUCGAAGGAAUGUCUUCCGAGUGUGG
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Structure
        10         20         30           40        50        60 
AGCAUAACCACGAUCCA-     U   -           ---|        CU     UUUUGUG 
                  CCUUC AGA CGAGACCCUAU   CAAUAUUGC  CUGCU       C
                  GGAAG UUU GUUCUGGGAUA   GUUAUAACG  GAUGA       A
GGUGUGAGCCUUCUGUAA     C   G           UUC^        U-     GGUGUAU 
    120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Star sequence

Loc-Mir-130-P3a_5p*
mirBase accessionNone
Sequence 
0- ACCCUAUCAAUAUUGCCUCUGCU -23
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Mature sequence

Loc-Mir-130-P3a_3p
mirBase accessionNone
Sequence 
41- UAGUGCAAUAUUGCUUAUAGGGUCU -66
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