Mir-26-P2a

MirGeneDB ID

Mal-Mir-26-P2a

Family name

MIR-26 (all species)

Seed

UCAAGUA

Species

Asian swamp eel (Monopterus albus)

MiRBase ID

Paralogues

Mal-Mir-26-P1a Mal-Mir-26-P1b Mal-Mir-26-P2b Mal-Mir-26-P4

Orthologues

Aca-Mir-26-P2 Bta-Mir-26-P2 Cfa-Mir-26-P2 Cja-Mir-26-P2 Cli-Mir-26-P2 Cpi-Mir-26-P2 Cpo-Mir-26-P2 Dno-Mir-26-P2 Dre-Mir-26-P2a Eca-Mir-26-P2 Ete-Mir-26-P2 Gga-Mir-26-P2 Gja-Mir-26-P2 Gmo-Mir-26-P2a Hsa-Mir-26-P2 Laf-Mir-26-P2 Lch-Mir-26-P2 Loc-Mir-26-P2 Mdo-Mir-26-P2 Mml-Mir-26-P2 Mmr-Mir-26-P2 Mmu-Mir-26-P2 Mun-Mir-26-P2 Neu-Mir-26-P2 Oan-Mir-26-P2 Ocu-Mir-26-P2 Pab-Mir-26-P2 Pbv-Mir-26-P2 Pma-Mir-26-o2 Rno-Mir-26-P2 Sha-Mir-26-P2 Spt-Mir-26-P2 Sto-Mir-26-P2 Tgu-Mir-26-P2

Node of Origin (locus)

Clupeocephala

Node of Origin (family)

Vertebrata

Genome context
(GCA_001952655.1_M_albus_1.0_genomic)

KV884797.1: 147178-147238 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

AACUGUGCUAUCCAAAGGGCCUGGGUCUGUUUCAAGUAAUCCAGGAUAGGCUUGUUAAAGUGGGGGAAGCCUAUUCAGGAUGACUUGGUUCAGAAACAAGGCUGCCAGCAUCAUAGUGGAA

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Structure

        10         20         30        40        50          
AACUGUGCUAUCCAAAG-    -| GG    UU      A    A         UGUUAAA 
                  GGCC UG  UCUG  UCAAGU AUCC GGAUAGGCU       \
                  UCGG AC  AGAC  GGUUCA UAGG CUUAUCCGA       G
AAGGUGAUACUACGACCG    A^ AA    UU      G    A         AGGGGGU 
 .       110       100        90        80        70

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17), UGUG in loop

Tissue expression

Fe	Fe	In	Ma	Ma

Mature sequence

Mal-Mir-26-P2a_5p

mirBase accession

None

Sequence

0- UUCAAGUAAUCCAGGAUAGGCU -22

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Star sequence

Mal-Mir-26-P2a_3p*

mirBase accession

None

Sequence

39- CCUAUUCAGGAUGACUUGGUUC -61

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