MirGeneDB 2.1

MirGeneDB ID

Pbv-Mir-26-P2

Family name MIR-26 (all species)
Seed UCAAGUA
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-26-1
Paralogues Pbv-Mir-26-P1  Pbv-Mir-26-P4 
Orthologues Aca-Mir-26-P2  Bta-Mir-26-P2  Cfa-Mir-26-P2  Cli-Mir-26-P2  Cpi-Mir-26-P2  Cpo-Mir-26-P2  Dno-Mir-26-P2  Dre-Mir-26-P2a  Ete-Mir-26-P2  Gga-Mir-26-P2  Gja-Mir-26-P2  Gmo-Mir-26-P2a  Gmo-Mir-26-P2b  Hsa-Mir-26-P2  Lch-Mir-26-P2  Loc-Mir-26-P2  Mal-Mir-26-P2a  Mal-Mir-26-P2b  Mdo-Mir-26-P2  Mml-Mir-26-P2  Mmu-Mir-26-P2  Mun-Mir-26-P2  Oan-Mir-26-P2  Ocu-Mir-26-P2  Pma-Mir-26-o2  Rno-Mir-26-P2  Sha-Mir-26-P2  Spt-Mir-26-P2  Sto-Mir-26-P2  Tgu-Mir-26-P2  Tni-Mir-26-P2b  Xla-Mir-26-P2e  Xla-Mir-26-P2f  Xtr-Mir-26-P2c  Xtr-Mir-26-P2d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)
KE955533.1: 16656-16716 [+]
Precursor
(pre-Mir +30nt flank)
CUAUUCCCAUUUACAAAGGCUGUGGCUAGGUUCAAGUAAUCCAGGAUAGGCUGUAGGUACAGCAGUCAGCCUGUUCUCGAUUACUUGGCCUUGGAGGCAGCCAGCAGCAUCAAUCACAGUG
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Structure
        10          20        30        40        50          
CUAUUCCCAUUUACAAA--|     GG     UU         C          GUAGGUA 
                   GGCUGU  CUAGG  CAAGUAAUC AGGAUAGGCU       \
                   CCGACG  GGUUC  GUUCAUUAG UCUUGUCCGA       C
GUGACACUAACUACGACGA^     GA     CG         C          CUGACGA 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Pbv-Mir-26-P2_5p

mirBase accessionMIMAT0038858
Sequence
0- UUCAAGUAAUCCAGGAUAGGCU -22
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Star sequence

Pbv-Mir-26-P2_3p*

mirBase accessionMIMAT0038859
Sequence
39- CCUGUUCUCGAUUACUUGGCCU -61
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