MirGeneDB 3.0
MirGeneDB ID

Gmo-Mir-26-P2b

Family name MIR-26 (all species)
Seed UCAAGUA
Species Cod (Gadus morhua)
MiRBase ID gmo-mir-26b
Paralogues Gmo-Mir-26-P1a  Gmo-Mir-26-P1b  Gmo-Mir-26-P2a  Gmo-Mir-26-P4 
Orthologues Aca-Mir-26-P2  Bta-Mir-26-P2  Cfa-Mir-26-P2  Cja-Mir-26-P2  Cli-Mir-26-P2  Cpi-Mir-26-P2  Cpo-Mir-26-P2  Dno-Mir-26-P2  Eca-Mir-26-P2  Ete-Mir-26-P2  Gga-Mir-26-P2  Gja-Mir-26-P2  Hsa-Mir-26-P2  Laf-Mir-26-P2  Lch-Mir-26-P2  Loc-Mir-26-P2  Mal-Mir-26-P2b  Mdo-Mir-26-P2  Mml-Mir-26-P2  Mmr-Mir-26-P2  Mmu-Mir-26-P2  Mun-Mir-26-P2  Neu-Mir-26-P2  Oan-Mir-26-P2  Ocu-Mir-26-P2  Pab-Mir-26-P2  Pbv-Mir-26-P2  Pma-Mir-26-o2  Rno-Mir-26-P2  Sha-Mir-26-P2  Spt-Mir-26-P2  Sto-Mir-26-P2  Tgu-Mir-26-P2  Tni-Mir-26-P2b 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(Gadus_morhua.gadMor1.dna.toplevel)		 GeneScaffold_2973: 151876-151939 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUGUAGCAGUGAAUUCUGGGCCGGGCCUGGUUCAAGUAAUCCAGGAUAGGUUUGUUCUGACAAGCAGUAAAGCCUAUUCAGGAUGACUUGUUUCAGGAACGCCGCCCUCACUCCACGCCACGGA
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Structure
        10        20          30        40        50        60 
UUGUAGCAGUGAAUUCUG   --| GG     UU     A    A         UGUUCUGA 
                  GGC  CG  CCUGG  CAAGU AUCC GGAUAGGUU        C
                  CCG  GC  GGACU  GUUCA UAGG CUUAUCCGA        A
AGGCACCGCACCUCACUC   CC^ AA     UU     G    A         AAUGACGA 
  120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Br Gi He In Li Sk Sp Wh
Mature sequence

Gmo-Mir-26-P2b_5p
mirBase accessionMIMAT0044207
Sequence 
0- UUCAAGUAAUCCAGGAUAGGUU -22
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Star sequence

Gmo-Mir-26-P2b_3p*
mirBase accessionNone
Sequence 
42- CCUAUUCAGGAUGACUUGUUUC -64
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