MirGeneDB ID | Mml-Mir-26-P2 |
Family name |
MIR-26 (all species) |
Seed |
UCAAGUA |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-26b
|
Paralogues |
Mml-Mir-26-P1
Mml-Mir-26-P4
|
Orthologues |
Aca-Mir-26-P2
Bta-Mir-26-P2
Cfa-Mir-26-P2
Cja-Mir-26-P2
Cli-Mir-26-P2
Cpi-Mir-26-P2
Cpo-Mir-26-P2
Dno-Mir-26-P2
Dre-Mir-26-P2a
Eca-Mir-26-P2
Ete-Mir-26-P2
Gga-Mir-26-P2
Gja-Mir-26-P2
Gmo-Mir-26-P2a
Gmo-Mir-26-P2b
Hsa-Mir-26-P2
Laf-Mir-26-P2
Lch-Mir-26-P2
Loc-Mir-26-P2
Mal-Mir-26-P2a
Mal-Mir-26-P2b
Mdo-Mir-26-P2
Mmr-Mir-26-P2
Mmu-Mir-26-P2
Mun-Mir-26-P2
Neu-Mir-26-P2
Oan-Mir-26-P2
Ocu-Mir-26-P2
Pab-Mir-26-P2
Pbv-Mir-26-P2
Pma-Mir-26-o2
Rno-Mir-26-P2
Sha-Mir-26-P2
Spt-Mir-26-P2
Sto-Mir-26-P2
Tgu-Mir-26-P2
Tni-Mir-26-P2b
Xla-Mir-26-P2e
Xla-Mir-26-P2f
Xtr-Mir-26-P2c
Xtr-Mir-26-P2d
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Vertebrata
|
Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014347.1: 105820507-105820563 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CCCCCUCGCCCCACCCUGCCCGGGACCCAGUUCAAGUAAUUCAGGAUAGGUUGUGUGCUGUCCAGCCUGUUCUCCAUUACUUGGCUCGGGGACCGGUGCCCUGCAGCCUUGGGGUGA
Get precursor sequence
|
Structure | 10 20 30 40 50
CCCCCUCGCCCCACCCU- - GA -| U UC GUGUG
GC CCGG CCC AGU CAAGUAAU AGGAUAGGUU \
CG GGCC GGG UCG GUUCAUUA UCUUGUCCGA C
AGUGGGGUUCCGACGUCC U AG C^ - CC CCUGU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17), UGUG in loop |
Tissue expression
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Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Mature sequence |
Mml-Mir-26-P2_5p |
mirBase accession | MIMAT0006166 |
Sequence |
0- UUCAAGUAAUUCAGGAUAGGUU -22
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-26b-5p
|
Star sequence |
Mml-Mir-26-P2_3p* |
mirBase accession | MIMAT0026801 |
Sequence |
35- CCUGUUCUCCAUUACUUGGCUC -57
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-26b-3p
|