| MirGeneDB ID | Lch-Mir-26-P2 |
|---|---|
| Family name | MIR-26 (all species) |
| Seed | UCAAGUA |
| Species | Coelacanth (Latimeria chalumnae) |
| MiRBase ID | |
| Paralogues | Lch-Mir-26-P1 Lch-Mir-26-P4 |
| Orthologues | Aca-Mir-26-P2 Bta-Mir-26-P2 Cfa-Mir-26-P2 Cli-Mir-26-P2 Cpi-Mir-26-P2 Cpo-Mir-26-P2 Dno-Mir-26-P2 Dre-Mir-26-P2a Ete-Mir-26-P2 Gga-Mir-26-P2 Gja-Mir-26-P2 Gmo-Mir-26-P2a Gmo-Mir-26-P2b Hsa-Mir-26-P2 Loc-Mir-26-P2 Mal-Mir-26-P2a Mal-Mir-26-P2b Mdo-Mir-26-P2 Mml-Mir-26-P2 Mmu-Mir-26-P2 Mun-Mir-26-P2 Oan-Mir-26-P2 Ocu-Mir-26-P2 Pbv-Mir-26-P2 Pma-Mir-26-o2 Rno-Mir-26-P2 Sha-Mir-26-P2 Spt-Mir-26-P2 Sto-Mir-26-P2 Tgu-Mir-26-P2 Tni-Mir-26-P2b Xla-Mir-26-P2e Xla-Mir-26-P2f Xtr-Mir-26-P2c Xtr-Mir-26-P2d |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (LatCha1_add) |
JH128253.1: 141295-141355 [-] Ensembl |
| Precursor (pre-Mir +30nt flank) | GCUGGUGUUUCCGCUGCGGCCGGGACCAGCUUCAAGUAAUCCAGGAUAGGCUGUUAGUCACUAGCCCAGCCUAUUCUUGAUUACUUGGGUCUGGAGACGGCUAAUAAUCUUCAGAUUCAGCGet precursor sequence |
| Structure | 10 20 30 40 50 GCUGGUGUUUCCGCUGC--| GGA C C GUUAGUC GGCCG CCAG UUCAAGUAAUC AGGAUAGGCU \ UCGGC GGUC GGGUUCAUUAG UCUUAUCCGA A CGACUUAGACUUCUAAUAA^ AGA U U CCCGAUC . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Lch-Mir-26-P2_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UUCAAGUAAUCCAGGAUAGGCU -22
Get sequence
|
| Star sequence | Lch-Mir-26-P2_3p* (predicted) |
| mirBase accession | None |
| Sequence |
39- CCUAUUCUUGAUUACUUGGGUC -61
Get sequence
|
