MirGeneDB 3.0
MirGeneDB ID

Gmo-Mir-26-P2a

Family name MIR-26 (all species)
Seed UCAAGUA
Species Cod (Gadus morhua)
MiRBase ID gmo-mir-26a-4
Paralogues Gmo-Mir-26-P1a  Gmo-Mir-26-P1b  Gmo-Mir-26-P2b  Gmo-Mir-26-P4 
Orthologues Aca-Mir-26-P2  Bta-Mir-26-P2  Cfa-Mir-26-P2  Cja-Mir-26-P2  Cli-Mir-26-P2  Cpi-Mir-26-P2  Cpo-Mir-26-P2  Dno-Mir-26-P2  Dre-Mir-26-P2a  Eca-Mir-26-P2  Ete-Mir-26-P2  Gga-Mir-26-P2  Gja-Mir-26-P2  Hsa-Mir-26-P2  Laf-Mir-26-P2  Lch-Mir-26-P2  Loc-Mir-26-P2  Mal-Mir-26-P2a  Mdo-Mir-26-P2  Mml-Mir-26-P2  Mmr-Mir-26-P2  Mmu-Mir-26-P2  Mun-Mir-26-P2  Neu-Mir-26-P2  Oan-Mir-26-P2  Ocu-Mir-26-P2  Pab-Mir-26-P2  Pbv-Mir-26-P2  Pma-Mir-26-o2  Rno-Mir-26-P2  Sha-Mir-26-P2  Spt-Mir-26-P2  Sto-Mir-26-P2  Tgu-Mir-26-P2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(Gadus_morhua.gadMor1.dna.toplevel)		 GeneScaffold_1686: 271510-271572 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUGGAGAAGACUUGAGGGCUUGGGUCUGUUUCAAGUAAUCCAGGAUAGGCUUGUUGAAACCAGGGGAAGGCCUAUUCGGGGUGACUUGGUUCAGAAACAAGGCCACCAGCAUCCUGCUUGGA
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Structure
        10          20        30        40        50        60 
CUUGGAGAAGACUUGAG-  -|   GG    UU      A    A         UGUUGAAA 
                  GG CUUG  UCUG  UCAAGU AUCC GGAUAGGCU        \
                  CC GAAC  AGAC  GGUUCA UGGG CUUAUCCGG        C
AGGUUCGUCCUACGACCA  G^   AA    UU      G    G         AAGGGGAC 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Br Gi He In Li Sk Sp Wh
Mature sequence

Gmo-Mir-26-P2a_5p
mirBase accessionMIMAT0044164
Sequence 
0- UUCAAGUAAUCCAGGAUAGGCU -22
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Star sequence

Gmo-Mir-26-P2a_3p*
mirBase accessionMIMAT0046042
Sequence 
41- CCUAUUCGGGGUGACUUGGUUC -63
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