MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-26-P2

Family name MIR-26 (all species)
Seed UCAAGUA
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-26-P1  Sto-Mir-26-P4 
Orthologues Aca-Mir-26-P2  Bta-Mir-26-P2  Cfa-Mir-26-P2  Cja-Mir-26-P2  Cli-Mir-26-P2  Cpi-Mir-26-P2  Cpo-Mir-26-P2  Dno-Mir-26-P2  Dre-Mir-26-P2a  Eca-Mir-26-P2  Ete-Mir-26-P2  Gga-Mir-26-P2  Gja-Mir-26-P2  Gmo-Mir-26-P2a  Gmo-Mir-26-P2b  Hsa-Mir-26-P2  Laf-Mir-26-P2  Lch-Mir-26-P2  Loc-Mir-26-P2  Mal-Mir-26-P2a  Mal-Mir-26-P2b  Mdo-Mir-26-P2  Mml-Mir-26-P2  Mmr-Mir-26-P2  Mmu-Mir-26-P2  Mun-Mir-26-P2  Neu-Mir-26-P2  Oan-Mir-26-P2  Ocu-Mir-26-P2  Pab-Mir-26-P2  Pbv-Mir-26-P2  Pma-Mir-26-o2  Rno-Mir-26-P2  Sha-Mir-26-P2  Spt-Mir-26-P2  Tgu-Mir-26-P2  Tni-Mir-26-P2b  Xla-Mir-26-P2e  Xla-Mir-26-P2f  Xtr-Mir-26-P2c  Xtr-Mir-26-P2d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01020652.1: 7259-7319 [+]
Precursor
(pre-Mir +30nt flank)
GGCUGGAGCCGUGCUGAGGCUGUGACUUGAUUCAAGUAAUCCAGGAUAGGCUGUUCAGUGAAACUCUGGCCUGUCCUUGACUACUUGGCUCUGGAGGCAGCCAUGCCCAUCGCCCUCGACC
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Structure
        10          20        30        40        50          
GGCUGGAGCCGUGCUGA--|     GA  U  UU      A  C          GUUCAGU 
                   GGCUGU  CU GA  CAAGUA UC AGGAUAGGCU       \
                   CCGACG  GG CU  GUUCAU AG UCCUGUCCGG       G
CCAGCUCCCGCUACCCGUA^     GA  U  CG      C  U          UCUCAAA 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Sto-Mir-26-P2_5p
mirBase accessionNone
Sequence 
0- UUCAAGUAAUCCAGGAUAGGCU -22
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Star sequence

Sto-Mir-26-P2_3p*
mirBase accessionNone
Sequence 
39- CCUGUCCUUGACUACUUGGCUC -61
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