MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-26-P4

Family name MIR-26 (all species)
Seed UCAAGUA
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-26-P1  Sto-Mir-26-P2 
Orthologues Aca-Mir-26-P4  Ami-Mir-26-P4  Bta-Mir-26-P4  Cfa-Mir-26-P4  Cja-Mir-26-P4  Cpi-Mir-26-P4  Cpo-Mir-26-P4  Dno-Mir-26-P4  Dre-Mir-26-P4  Eca-Mir-26-P4  Ete-Mir-26-P4  Gga-Mir-26-P4  Gja-Mir-26-P4  Gmo-Mir-26-P4  Hsa-Mir-26-P4  Laf-Mir-26-P4  Lch-Mir-26-P4  Loc-Mir-26-P4  Mal-Mir-26-P4  Mdo-Mir-26-P4  Mml-Mir-26-P4  Mmr-Mir-26-P4  Mmu-Mir-26-P4  Mun-Mir-26-P4  Neu-Mir-26-P4  Oan-Mir-26-P4  Ocu-Mir-26-P4  Pab-Mir-26-P4  Pbv-Mir-26-P4  Pma-Mir-26-o4  Rno-Mir-26-P4  Sha-Mir-26-P4  Spt-Mir-26-P4  Tgu-Mir-26-P4  Tni-Mir-26-P4  Xla-Mir-26-P4a  Xla-Mir-26-P4b  Xtr-Mir-26-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01020753.1: 8269-8329 [-]
Precursor
(pre-Mir +30nt flank)
UGUCAGAAUUCGUGUCGAGCUAUCACCUGCUUCAAGUAAUCCAGGAUAGGCUGUGUCCGUUUAAGGUGGCCUAUUCUCGAUGACUUGUCUCAGGUGAUGGUCUGCUUCACACCUCCAAAGA
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Structure
        10          20        30        40        50          
UGUCAGAAUUCGUGUCGA--|          CUU     A   C          GUGUCCG 
                    GCUAUCACCUG   CAAGU AUC AGGAUAGGCU       \
                    UGGUAGUGGAC   GUUCA UAG UCUUAUCCGG       U
AGAAACCUCCACACUUCGUC^          UCU     G   C          UGGAAUU 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
To
Mature sequence

Sto-Mir-26-P4_5p
mirBase accessionNone
Sequence 
0- UUCAAGUAAUCCAGGAUAGGCU -22
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Star sequence

Sto-Mir-26-P4_3p*
mirBase accessionNone
Sequence 
39- CCUAUUCUCGAUGACUUGUCUC -61
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