Mir-26-P4

MirGeneDB ID

Hsa-Mir-26-P4

Family name

MIR-26 (all species)

Seed

UCAAGUA

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-26a-2

Paralogues

Hsa-Mir-26-P1 Hsa-Mir-26-P2

Orthologues

Aca-Mir-26-P4 Ami-Mir-26-P4 Bta-Mir-26-P4 Cfa-Mir-26-P4 Cja-Mir-26-P4 Cpi-Mir-26-P4 Cpo-Mir-26-P4 Dno-Mir-26-P4 Dre-Mir-26-P4 Eca-Mir-26-P4 Ete-Mir-26-P4 Gga-Mir-26-P4 Gja-Mir-26-P4 Gmo-Mir-26-P4 Laf-Mir-26-P4 Lch-Mir-26-P4 Loc-Mir-26-P4 Mal-Mir-26-P4 Mdo-Mir-26-P4 Mml-Mir-26-P4 Mmr-Mir-26-P4 Mmu-Mir-26-P4 Mun-Mir-26-P4 Neu-Mir-26-P4 Oan-Mir-26-P4 Ocu-Mir-26-P4 Pab-Mir-26-P4 Pbv-Mir-26-P4 Pma-Mir-26-o4 Rno-Mir-26-P4 Sha-Mir-26-P4 Spt-Mir-26-P4 Sto-Mir-26-P4 Tgu-Mir-26-P4 Tni-Mir-26-P4 Xla-Mir-26-P4a Xla-Mir-26-P4b Xtr-Mir-26-P4

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(hg38)

chr12: 57824620-57824679 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CAGAAAGCUCCCAUAGAGGCUGUGGCUGGAUUCAAGUAAUCCAGGAUAGGCUGUUUCCAUCUGUGAGGCCUAUUCUUGAUUACUUGUUUCUGGAGGCAGCUGAUGGUCCGCCGCCGGAAA

Get precursor sequence

Structure

        10          20        30        40        50         
CAGAAAGCUCCCAUAGA--|     GG UG  UU         C          GUUUCC 
                   GGCUGU  C  GA  CAAGUAAUC AGGAUAGGCU      A
                   UCGACG  G  CU  GUUCAUUAG UCUUAUCCGG      U
AAAGGCCGCCGCCUGGUAG^     GA GU  UU         U          AGUGUC 
.       110       100        90        80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Dc	Dc	Dr	Dr	Xp	Xp	Bl	Br	Br	Ce	Ce	Co	Fo	He	Ki	Le	Li	Li	Lu	Pa	Pl	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Mature sequence

Hsa-Mir-26-P4_5p

mirBase accession

MIMAT0000082

Sequence

0- UUCAAGUAAUCCAGGAUAGGCU -22

Get sequence

Proposed targets

microrna.org: MIMAT0000082
TargetScanVert: hsa-miR-26a-5p
TargetMiner: hsa-miR-26a-5p
miRDB: MIMAT0000082

Star sequence

Hsa-Mir-26-P4_3p*

mirBase accession

MIMAT0004681

Sequence

38- CCUAUUCUUGAUUACUUGUUUC -60

Get sequence

Proposed targets

microrna.org: MIMAT0004681
TargetScanVert: hsa-miR-26a-2-3p
TargetMiner: hsa-miR-26a-2-3p
miRDB: MIMAT0004681