Mir-26-P4

MirGeneDB ID

Mun-Mir-26-P4

Family name

MIR-26 (all species)

Seed

UCAAGUA

Species

Microcaecilia (Microcaecilia unicolor)

MiRBase ID

Paralogues

Mun-Mir-26-P1 Mun-Mir-26-P2

Orthologues

Aca-Mir-26-P4 Ami-Mir-26-P4 Bta-Mir-26-P4 Cfa-Mir-26-P4 Cja-Mir-26-P4 Cpi-Mir-26-P4 Cpo-Mir-26-P4 Dno-Mir-26-P4 Dre-Mir-26-P4 Eca-Mir-26-P4 Ete-Mir-26-P4 Gga-Mir-26-P4 Gja-Mir-26-P4 Gmo-Mir-26-P4 Hsa-Mir-26-P4 Laf-Mir-26-P4 Lch-Mir-26-P4 Loc-Mir-26-P4 Mal-Mir-26-P4 Mdo-Mir-26-P4 Mml-Mir-26-P4 Mmr-Mir-26-P4 Mmu-Mir-26-P4 Neu-Mir-26-P4 Oan-Mir-26-P4 Ocu-Mir-26-P4 Pab-Mir-26-P4 Pbv-Mir-26-P4 Pma-Mir-26-o4 Rno-Mir-26-P4 Sha-Mir-26-P4 Spt-Mir-26-P4 Sto-Mir-26-P4 Tgu-Mir-26-P4 Tni-Mir-26-P4 Xla-Mir-26-P4a Xla-Mir-26-P4b Xtr-Mir-26-P4

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(Mun_miRNA_loci)

26-P3_LR594634.1:308299270-308299531: 101-162 [+]

Precursor
(pre-Mir +30nt flank)

GACACAGCUUUGAAAGUGGCCACAGCCGGGUUCAAGUAAUCCAGGAUAGGCUGUUUCCAUGGCAACGCGGCCUACUCUUGAUUACUUGUUCCAGGAGGCGGCCAGUGCACAUCAUAACGCUU

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Structure

        10          20        30        40        50        60
GACACAGCUUUGAAAGU--|   ACAG  G  UU         C  GA      GUUUCCA 
                   GGCC    CC GG  CAAGUAAUC AG  UAGGCU       U
                   CCGG    GG CC  GUUCAUUAG UC  AUCCGG       G
UUCGCAAUACUACACGUGA^   CGGA  A  UU         U  UC      CGCAACG 
120       110       100        90        80        70

Deep sequencing

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3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

To

Mature sequence

Mun-Mir-26-P4_5p

mirBase accession

None

Sequence

0- UUCAAGUAAUCCAGGAUAGGCU -22

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Star sequence

Mun-Mir-26-P4_3p*

mirBase accession

None

Sequence

40- CCUACUCUUGAUUACUUGUUCC -62

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