MirGeneDB 3.0

MirGeneDB ID

Neu-Mir-26-P4

Family name MIR-26 (all species)
Seed UCAAGUA
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-26-P1  Neu-Mir-26-P2 
Orthologues Aca-Mir-26-P4  Ami-Mir-26-P4  Bta-Mir-26-P4  Cfa-Mir-26-P4  Cja-Mir-26-P4  Cpi-Mir-26-P4  Cpo-Mir-26-P4  Dno-Mir-26-P4  Dre-Mir-26-P4  Eca-Mir-26-P4  Ete-Mir-26-P4  Gga-Mir-26-P4  Gja-Mir-26-P4  Gmo-Mir-26-P4  Hsa-Mir-26-P4  Laf-Mir-26-P4  Lch-Mir-26-P4  Loc-Mir-26-P4  Mal-Mir-26-P4  Mdo-Mir-26-P4  Mml-Mir-26-P4  Mmr-Mir-26-P4  Mmu-Mir-26-P4  Mun-Mir-26-P4  Oan-Mir-26-P4  Ocu-Mir-26-P4  Pab-Mir-26-P4  Pbv-Mir-26-P4  Pma-Mir-26-o4  Rno-Mir-26-P4  Sha-Mir-26-P4  Spt-Mir-26-P4  Sto-Mir-26-P4  Tgu-Mir-26-P4  Tni-Mir-26-P4  Xla-Mir-26-P4a  Xla-Mir-26-P4b  Xtr-Mir-26-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_028372415.1_mMacEug1.pri)
CM051815.1: 233187975-233188033 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGGAAGAUUCAGCAAAGGCUGCGGCCAGGUUCAAGUAAUCCAGGAUAGGCUGUGUCCAGCUGCUGGCCUAUUCUUGAUUACUUGUUUCUGGAGGCAGCUAACUGCACACUGCCAGAAG
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Structure
        10          20        30        40        50         
CAGGAAGAUUCAGCAAA--|     GG     UU         C          GUGUCC 
                   GGCUGC  CCAGG  CAAGUAAUC AGGAUAGGCU      \
                   UCGACG  GGUCU  GUUCAUUAG UCUUAUCCGG      A
GAAGACCGUCACACGUCAA^     GA     UU         U          UCGUCG 
       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsUGUG in loop
Tissue expression
 +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-26-P4_5p

mirBase accessionNone
Sequence
0- UUCAAGUAAUCCAGGAUAGGCU -22
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Star sequence

Neu-Mir-26-P4_3p* (predicted)

mirBase accessionNone
Sequence
37- CCUAUUCUUGAUUACUUGUUUC -59
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