MirGeneDB 3.0
MirGeneDB ID

Cpi-Mir-26-P4

Family name MIR-26 (all species)
Seed UCAAGUA
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-26-2
Paralogues Cpi-Mir-26-P1  Cpi-Mir-26-P2 
Orthologues Aca-Mir-26-P4  Ami-Mir-26-P4  Bta-Mir-26-P4  Cfa-Mir-26-P4  Cja-Mir-26-P4  Cpo-Mir-26-P4  Dno-Mir-26-P4  Dre-Mir-26-P4  Eca-Mir-26-P4  Ete-Mir-26-P4  Gga-Mir-26-P4  Gja-Mir-26-P4  Gmo-Mir-26-P4  Hsa-Mir-26-P4  Laf-Mir-26-P4  Lch-Mir-26-P4  Loc-Mir-26-P4  Mal-Mir-26-P4  Mdo-Mir-26-P4  Mml-Mir-26-P4  Mmr-Mir-26-P4  Mmu-Mir-26-P4  Mun-Mir-26-P4  Neu-Mir-26-P4  Oan-Mir-26-P4  Ocu-Mir-26-P4  Pab-Mir-26-P4  Pbv-Mir-26-P4  Pma-Mir-26-o4  Rno-Mir-26-P4  Sha-Mir-26-P4  Spt-Mir-26-P4  Sto-Mir-26-P4  Tgu-Mir-26-P4  Tni-Mir-26-P4  Xla-Mir-26-P4a  Xla-Mir-26-P4b  Xtr-Mir-26-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(chrPic1)		 JH584683: 12190854-12190914 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGCGGAGGAUCUGCGGAGGCCGUAGCCCGGUUCAAGUAAUCCAGGAUAGGCUGUUACCAGGCAGCACGGCCUAUUCUUGAUUACUUGUUUCAGGAGGCGGCUGCUGGCGCCGGAGGAAGAU
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Structure
        10          20        30        40        50          
CGCGGAGGAUCUGCGGA--|     AG  C  UU         C          GUUACCA 
                   GGCCGU  CC GG  CAAGUAAUC AGGAUAGGCU       \
                   UCGGCG  GG CU  GUUCAUUAG UCUUAUCCGG       G
UAGAAGGAGGCCGCGGUCG^     GA  A  UU         U          CACGACG 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Te Te Te To
Mature sequence

Cpi-Mir-26-P4_5p
mirBase accessionMIMAT0037660
Sequence 
0- UUCAAGUAAUCCAGGAUAGGCU -22
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Star sequence

Cpi-Mir-26-P4_3p*
mirBase accessionMIMAT0037662
Sequence 
39- CCUAUUCUUGAUUACUUGUUUC -61
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