MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-26-P4

Family name MIR-26 (all species)
Seed UCAAGUA
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-26a-2
Paralogues Cpo-Mir-26-P1  Cpo-Mir-26-P2 
Orthologues Aca-Mir-26-P4  Ami-Mir-26-P4  Bta-Mir-26-P4  Cfa-Mir-26-P4  Cja-Mir-26-P4  Cpi-Mir-26-P4  Dno-Mir-26-P4  Dre-Mir-26-P4  Eca-Mir-26-P4  Ete-Mir-26-P4  Gga-Mir-26-P4  Gja-Mir-26-P4  Gmo-Mir-26-P4  Hsa-Mir-26-P4  Laf-Mir-26-P4  Lch-Mir-26-P4  Loc-Mir-26-P4  Mal-Mir-26-P4  Mdo-Mir-26-P4  Mml-Mir-26-P4  Mmr-Mir-26-P4  Mmu-Mir-26-P4  Mun-Mir-26-P4  Neu-Mir-26-P4  Oan-Mir-26-P4  Ocu-Mir-26-P4  Pab-Mir-26-P4  Pbv-Mir-26-P4  Pma-Mir-26-o4  Rno-Mir-26-P4  Sha-Mir-26-P4  Spt-Mir-26-P4  Sto-Mir-26-P4  Tgu-Mir-26-P4  Tni-Mir-26-P4  Xla-Mir-26-P4a  Xla-Mir-26-P4b  Xtr-Mir-26-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(cavPor3)		 scaffold_9: 40004275-40004334 [+] UCSC
Precursor
(pre-Mir +30nt flank)
CACAAUGCUCCCACAGAGGCUGUGGCUGGAUUCAAGUAAUCCAGGAUAGGCUGUUUCCAUCUGUGAGGCCUAUUCUUGAUUACUUGUUUCCGGAGGCAGCUGAUGGCCCACCGUCGGAAU
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Structure
        10          20        30        40        50         
CACAAUGCUCCCACAGA--|     GG     UU         C          GUUUCC 
                   GGCUGU  CUGGA  CAAGUAAUC AGGAUAGGCU      A
                   UCGACG  GGCCU  GUUCAUUAG UCUUAUCCGG      U
UAAGGCUGCCACCCGGUAG^     GA     UU         U          AGUGUC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Mature sequence

Cpo-Mir-26-P4_5p
mirBase accessionMIMAT0046885
Sequence 
0- UUCAAGUAAUCCAGGAUAGGCU -22
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Star sequence

Cpo-Mir-26-P4_3p*
mirBase accessionMIMAT0046887
Sequence 
38- CCUAUUCUUGAUUACUUGUUUC -60
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