Mir-26-P2

MirGeneDB ID

Hsa-Mir-26-P2

Family name

MIR-26 (all species)

Seed

UCAAGUA

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-26b

Paralogues

Hsa-Mir-26-P1 Hsa-Mir-26-P4

Orthologues

Aca-Mir-26-P2 Bta-Mir-26-P2 Cfa-Mir-26-P2 Cja-Mir-26-P2 Cli-Mir-26-P2 Cpi-Mir-26-P2 Cpo-Mir-26-P2 Dno-Mir-26-P2 Dre-Mir-26-P2a Eca-Mir-26-P2 Ete-Mir-26-P2 Gga-Mir-26-P2 Gja-Mir-26-P2 Gmo-Mir-26-P2a Gmo-Mir-26-P2b Laf-Mir-26-P2 Lch-Mir-26-P2 Loc-Mir-26-P2 Mal-Mir-26-P2a Mal-Mir-26-P2b Mdo-Mir-26-P2 Mml-Mir-26-P2 Mmr-Mir-26-P2 Mmu-Mir-26-P2 Mun-Mir-26-P2 Neu-Mir-26-P2 Oan-Mir-26-P2 Ocu-Mir-26-P2 Pab-Mir-26-P2 Pbv-Mir-26-P2 Pma-Mir-26-o2 Rno-Mir-26-P2 Sha-Mir-26-P2 Spt-Mir-26-P2 Sto-Mir-26-P2 Tgu-Mir-26-P2 Tni-Mir-26-P2b Xla-Mir-26-P2e Xla-Mir-26-P2f Xtr-Mir-26-P2c Xtr-Mir-26-P2d

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(hg38)

chr2: 218402657-218402713 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CUCCCUCGCCCCACCCUGCCCGGGACCCAGUUCAAGUAAUUCAGGAUAGGUUGUGUGCUGUCCAGCCUGUUCUCCAUUACUUGGCUCGGGGACCGGUGCCCUGCAGCCUUGGGGUGA

Get precursor sequence

Structure

        10          20         30        40        50        
CUCCCUCGCCCCACCCU-  -    GA   -|  U        UC          GUGUG 
                  GC CCGG  CCC AGU CAAGUAAU  AGGAUAGGUU     \
                  CG GGCC  GGG UCG GUUCAUUA  UCUUGUCCGA     C
AGUGGGGUUCCGACGUCC  U    AG   C^  -        CC          CCUGU 
     110       100        90         80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17), UGUG in loop

Tissue expression

Dc	Dc	Dr	Dr	Xp	Xp	Bl	Br	Br	Ce	Ce	Co	Fo	He	Ki	Le	Li	Li	Lu	Pa	Pl	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Mature sequence

Hsa-Mir-26-P2_5p

mirBase accession

MIMAT0000083

Sequence

0- UUCAAGUAAUUCAGGAUAGGUU -22

Get sequence

Proposed targets

microrna.org: MIMAT0000083
TargetScanVert: hsa-miR-26b-5p
TargetMiner: hsa-miR-26b-5p
miRDB: MIMAT0000083

Star sequence

Hsa-Mir-26-P2_3p*

mirBase accession

MIMAT0004500

Sequence

35- CCUGUUCUCCAUUACUUGGCUC -57

Get sequence

Proposed targets

microrna.org: MIMAT0004500
TargetScanVert: hsa-miR-26b-3p
TargetMiner: hsa-miR-26b-3p
miRDB: MIMAT0004500