MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-26-P2

Family name MIR-26 (all species)
Seed UCAAGUA
Species Human (Homo sapiens)
MiRBase ID hsa-mir-26b
Paralogues Hsa-Mir-26-P1  Hsa-Mir-26-P4 
Orthologues Aca-Mir-26-P2  Bta-Mir-26-P2  Cfa-Mir-26-P2  Cli-Mir-26-P2  Cpi-Mir-26-P2  Cpo-Mir-26-P2  Dno-Mir-26-P2  Dre-Mir-26-P2a  Ete-Mir-26-P2  Gga-Mir-26-P2  Gja-Mir-26-P2  Gmo-Mir-26-P2a  Gmo-Mir-26-P2b  Lch-Mir-26-P2  Loc-Mir-26-P2  Mal-Mir-26-P2a  Mal-Mir-26-P2b  Mdo-Mir-26-P2  Mml-Mir-26-P2  Mmu-Mir-26-P2  Mun-Mir-26-P2  Oan-Mir-26-P2  Ocu-Mir-26-P2  Pbv-Mir-26-P2  Pma-Mir-26-o2  Rno-Mir-26-P2  Sha-Mir-26-P2  Spt-Mir-26-P2  Sto-Mir-26-P2  Tgu-Mir-26-P2  Tni-Mir-26-P2b  Xla-Mir-26-P2e  Xla-Mir-26-P2f  Xtr-Mir-26-P2c  Xtr-Mir-26-P2d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(hg38)
chr2: 218402657-218402713 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCCCUCGCCCCACCCUGCCCGGGACCCAGUUCAAGUAAUUCAGGAUAGGUUGUGUGCUGUCCAGCCUGUUCUCCAUUACUUGGCUCGGGGACCGGUGCCCUGCAGCCUUGGGGUGA
Get precursor sequence
Structure
        10          20         30        40        50        
CUCCCUCGCCCCACCCU-  -    GA   -|  U        UC          GUGUG 
                  GC CCGG  CCC AGU CAAGUAAU  AGGAUAGGUU     \
                  CG GGCC  GGG UCG GUUCAUUA  UCUUGUCCGA     C
AGUGGGGUUCCGACGUCC  U    AG   C^  -        CC          CCUGU 
     110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
 +
1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 3- 3- 3- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 5- 5- 5- 5- 5- 5- 5- 6- 6- 6- 6- 6-
Mature sequence

Hsa-Mir-26-P2_5p

mirBase accessionMIMAT0000083
Sequence
0- UUCAAGUAAUUCAGGAUAGGUU -22
Get sequence
Proposed targets microrna.org: MIMAT0000083
TargetScanVert: hsa-miR-26b-5p
TargetMiner: hsa-miR-26b-5p
miRDB: MIMAT0000083
Star sequence

Hsa-Mir-26-P2_3p*

mirBase accessionMIMAT0004500
Sequence
35- CCUGUUCUCCAUUACUUGGCUC -57
Get sequence
Proposed targets microrna.org: MIMAT0004500
TargetScanVert: hsa-miR-26b-3p
TargetMiner: hsa-miR-26b-3p
miRDB: MIMAT0004500