MirGeneDB 2.1
MirGeneDB ID

Mal-Mir-29-P2b1-v1

Family name MIR-29 (all species)
Seed AGCACCA
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-29-P1b1-v1  Mal-Mir-29-P1b1-v2  Mal-Mir-29-P1b2-v1  Mal-Mir-29-P1b2-v2  Mal-Mir-29-P1d1  Mal-Mir-29-P1d2-v1  Mal-Mir-29-P1d2-v2  Mal-Mir-29-P2b1-v2  Mal-Mir-29-P2d1  Mal-Mir-29-P2d2 
Orthologues Aca-Mir-29-P2b  Ami-Mir-29-P2b  Asu-Mir-29-P2  Bfl-Mir-29-P2  Bla-Mir-29-P2  Bta-Mir-29-P2b  Cbr-Mir-29-P2  Cel-Mir-29-P2  Cfa-Mir-29-P2b  Cgi-Mir-29-P2  Cin-Mir-29-P2  Cli-Mir-29-P2b  Cmi-Mir-29-P2b  Cpi-Mir-29-P2b  Cpo-Mir-29-P2b  Csc-Mir-29-P2  Cte-Mir-29-P2  Dno-Mir-29-P2b  Dre-Mir-29-P2b1  Esc-Mir-29-P2  Ete-Mir-29-P2b  Gga-Mir-29-P2b  Gja-Mir-29-P2b  Gmo-Mir-29-P2b1  Hsa-Mir-29-P2b  Isc-Mir-29-P2  Lch-Mir-29-P2b  Lgi-Mir-29-P2  Loc-Mir-29-P2b  Mdo-Mir-29-P2b  Mml-Mir-29-P2b  Mmu-Mir-29-P2b  Mun-Mir-29-P2b  Npo-Mir-29-P2  Oan-Mir-29-P2b  Obi-Mir-29-P2  Ocu-Mir-29-P2b  Ovu-Mir-29-P2  Pbv-Mir-29-P2b  Pfl-Mir-29-P2  Pmi-Mir-29-P2  Rno-Mir-29-P2b  Sha-Mir-29-P2b  Sko-Mir-29-P2  Spt-Mir-29-P2b  Spu-Mir-29-P2  Sto-Mir-29-P2b  Tgu-Mir-29-P2b  Tni-Mir-29-P2b1  Xbo-Mir-29-P2  Xtr-Mir-29-P2b 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Bilateria
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884739.1: 6343485-6343545 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCCUACUCUUCUUUCACCACCAAAAGAUAACUGAUUUCUUCUGGUGCUUAGAGCUCACUACAGCCUUCUAGCACCAUUUGAAAUCGGUUAUAAAACUGUGGAUCAGUGCGUCUGUCAAUC
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Structure
        10          20        30        40        50        60
CUCCUACUCUUCUUUCA--|   CAAAAG            UUC       U   GCUCAC 
                   CCAC      AUAACUGAUUUC   UGGUGCU AGA      U
                   GGUG      UAUUGGCUAAAG   ACCACGA UCU      A
CUAACUGUCUGCGUGACUA^   UCAAAA            UUU       -   UCCGAC 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-29-P2b1-v1_5p*
mirBase accessionNone
Sequence 
0- ACUGAUUUCUUCUGGUGCUUAGA -23
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Mature sequence

Mal-Mir-29-P2b1-v1_3p
mirBase accessionNone
Sequence 
39- UAGCACCAUUUGAAAUCGGUUA -61
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