Mir-29-P2b

MirGeneDB ID	Lch-Mir-29-P2b
Family name	MIR-29 (all species)
Seed	AGCACCA
Species	Coelacanth (Latimeria chalumnae)
MiRBase ID
Paralogues	Lch-Mir-29-P1b Lch-Mir-29-P1d Lch-Mir-29-P2a Lch-Mir-29-P2d
Orthologues	Aca-Mir-29-P2b Ami-Mir-29-P2b Asu-Mir-29-P2 Bfl-Mir-29-P2 Bla-Mir-29-P2 Bta-Mir-29-P2b Cbr-Mir-29-P2 Cel-Mir-29-P2 Cfa-Mir-29-P2b Cgi-Mir-29-P2 Cin-Mir-29-P2 Cli-Mir-29-P2b Cmi-Mir-29-P2b Cpi-Mir-29-P2b Cpo-Mir-29-P2b Csc-Mir-29-P2 Cte-Mir-29-P2 Dno-Mir-29-P2b Dre-Mir-29-P2b1 Esc-Mir-29-P2 Ete-Mir-29-P2b Gga-Mir-29-P2b Gja-Mir-29-P2b Gmo-Mir-29-P2b1 Hsa-Mir-29-P2b Isc-Mir-29-P2 Lgi-Mir-29-P2 Loc-Mir-29-P2b Mal-Mir-29-P2b1-v1 Mal-Mir-29-P2b1-v2 Mdo-Mir-29-P2b Mml-Mir-29-P2b Mmu-Mir-29-P2b Mun-Mir-29-P2b Npo-Mir-29-P2 Oan-Mir-29-P2b Obi-Mir-29-P2 Ocu-Mir-29-P2b Ovu-Mir-29-P2 Pbv-Mir-29-P2b Pfl-Mir-29-P2 Pmi-Mir-29-P2 Rno-Mir-29-P2b Sha-Mir-29-P2b Sko-Mir-29-P2 Spt-Mir-29-P2b Spu-Mir-29-P2 Sto-Mir-29-P2b Tgu-Mir-29-P2b Tni-Mir-29-P2b1 Xbo-Mir-29-P2 Xla-Mir-29-P2b3 Xla-Mir-29-P2b4 Xtr-Mir-29-P2b
Node of Origin (locus)	Gnathostomata
Node of Origin (family)	Bilateria
Genome context (LatCha1_add)	JH127138.1: 247549-247607 [+] Ensembl
Precursor (pre-Mir +30nt flank)	GCGAACCGACAAAGCCCCUUUUAAAGGAUGACUGAUUUCUUUCGGUGUUCAGAGUCUGUUAUUUGUCUAGCACCAUUUGAAAUCGGUUAUAGUGAUUGGGGAAAAGCAGCAAUUUCUUC Get precursor sequence
Structure	10 20 30 40 50 GCGAACCGACAAAGCCC--\| UUAAAGG UUUC C GUCUG CUU AUGACUGAUUUC GGUGUU AGA U GGG UAUUGGCUAAAG CCACGA UCU U CUUCUUUAACGACGAAAAG^ UUAGUGA UUUA - GUUUA 110 100 90 80 70 60
Deep sequencing
3' NTU	Unknown
Motifs	CNNC at 3p(+17)
Star sequence	Lch-Mir-29-P2b_5p* (predicted)
mirBase accession	None
Sequence	0- ACUGAUUUCUUUCGGUGUUCAGA -23 Get sequence
Mature sequence	Lch-Mir-29-P2b_3p (predicted)
mirBase accession	None
Sequence	37- UAGCACCAUUUGAAAUCGGUUA -59 Get sequence

Lch-Mir-29-P2b

Lch-Mir-29-P2b_5p* (predicted)

Lch-Mir-29-P2b_3p (predicted)