MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-489-v1

Family name MIR-489 (all species)
Seed UGACAUC
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-489-v2 
Orthologues Aca-Mir-489-v1  Ami-Mir-489-v1  Bta-Mir-489-v1  Cfa-Mir-489  Cja-Mir-489  Cli-Mir-489-v1  Cpi-Mir-489-v1  Dno-Mir-489  Dre-Mir-489-v1  Eca-Mir-489  Gga-Mir-489-v1  Gja-Mir-489  Gmo-Mir-489-v1  Hsa-Mir-489-v1  Laf-Mir-489  Lch-Mir-489  Loc-Mir-489-v1  Mml-Mir-489-v1  Mmr-Mir-489  Mmu-Mir-489  Mun-Mir-489  Ocu-Mir-489  Pab-Mir-489  Pbv-Mir-489  Rno-Mir-489  Sha-Mir-489  Spt-Mir-489  Tgu-Mir-489-v1  Tni-Mir-489-v1  Xtr-Mir-489-v1 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884831.1: 258106-258164 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCAUCUGUUGAUAUUGGUGGUGGCCUGGUGGUCGUAUGUAUGACGUCAUUUACUUCAAUGUUUGGAGUGACAUCAUAUGUACGGCUGCUAAACUGCUACAUGGGACAUCAGCAUGUUU
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Structure
        10          20        30        40        50         
CUCAUCUGUUGAUAUUG--|   UG CC   UG             C       ACUUCA 
                   GUGG  G  UGG  GUCGUAUGUAUGA GUCAUUU      \
                   CAUC  C  AUC  CGGCAUGUAUACU CAGUGAG      A
UUUGUACGACUACAGGGUA^   GU AA   GU             A       GUUUGU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-489-v1_5p*
mirBase accessionNone
Sequence 
0- GGUCGUAUGUAUGACGUCAUUU -22
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Mature sequence

Mal-Mir-489-v1_3p
mirBase accessionNone
Sequence 
37- GUGACAUCAUAUGUACGGCUGC -59
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