MirGeneDB 3.0
MirGeneDB ID

Mmr-Mir-489

Family name MIR-489 (all species)
Seed GACAUCA
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-489-v1  Aca-Mir-489-v2  Ami-Mir-489-v1  Ami-Mir-489-v2  Bta-Mir-489-v1  Bta-Mir-489-v2  Bta-Mir-489-v3  Cfa-Mir-489  Cja-Mir-489  Cli-Mir-489-v1  Cli-Mir-489-v2  Cpi-Mir-489-v1  Cpi-Mir-489-v2  Dno-Mir-489  Dre-Mir-489-v1  Dre-Mir-489-v2  Eca-Mir-489  Gga-Mir-489-v1  Gga-Mir-489-v2  Gja-Mir-489  Gmo-Mir-489-v1  Gmo-Mir-489-v2  Hsa-Mir-489-v1  Hsa-Mir-489-v2  Laf-Mir-489  Lch-Mir-489  Loc-Mir-489-v1  Loc-Mir-489-v2  Mal-Mir-489-v1  Mal-Mir-489-v2  Mml-Mir-489-v1  Mml-Mir-489-v2  Mmu-Mir-489  Mun-Mir-489  Ocu-Mir-489  Pab-Mir-489  Pbv-Mir-489  Rno-Mir-489  Sha-Mir-489  Spt-Mir-489  Tgu-Mir-489-v1  Tgu-Mir-489-v2  Tni-Mir-489-v1  Tni-Mir-489-v2  Xla-Mir-489-P1-v1  Xla-Mir-489-P1-v2  Xla-Mir-489-P2-v1  Xla-Mir-489-P2-v2  Xtr-Mir-489-v1  Xtr-Mir-489-v2 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)		 CM007671.1: 58939901-58939963 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCUGACAACCACUGUUAGUGGCAGCUUCGUUGUUGUAUAUGCGGCGCCAUUUAACUUGAACCUUUAGUAGUGACAUCACAUAUACGGCAACUAAGCUGCUACAUCGAGCAACAAUUAAAAGG
Get precursor sequence
Structure
        10          20        30        40        50        60 
UGCUGACAACCACUGUUA--|         C             C  CGC    UAACUUGA 
                    GUGGCAGCUU GUUGUUGUAUAUG GG   CAUU        \
                    CAUCGUCGAA CAACGGCAUAUAC CU   GUGA        A
GGAAAAUUAACAACGAGCUA^         U             A  ACA    UGAUUUCC 
 120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Mi Mi Mi Mi Mi Mi Mi Mi
Star sequence

Mmr-Mir-489_5p*
mirBase accessionNone
Sequence 
0- UUGUUGUAUAUGCGGCGCCAUU -22
Get sequence
Mature sequence

Mmr-Mir-489_3p
mirBase accessionNone
Sequence 
41- UGACAUCACAUAUACGGCAACU -63
Get sequence