MirGeneDB 3.0
MirGeneDB ID

Mml-Mir-489-v1

Family name MIR-489 (all species)
Seed UGACAUC
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-489
Paralogues Mml-Mir-489-v2 
Orthologues Aca-Mir-489-v1  Ami-Mir-489-v1  Bta-Mir-489-v1  Cfa-Mir-489  Cja-Mir-489  Cli-Mir-489-v1  Cpi-Mir-489-v1  Dno-Mir-489  Dre-Mir-489-v1  Eca-Mir-489  Gga-Mir-489-v1  Gja-Mir-489  Gmo-Mir-489-v1  Hsa-Mir-489-v1  Laf-Mir-489  Lch-Mir-489  Loc-Mir-489-v1  Mal-Mir-489-v1  Mmr-Mir-489  Mmu-Mir-489  Mun-Mir-489  Ocu-Mir-489  Pab-Mir-489  Pbv-Mir-489  Rno-Mir-489  Sha-Mir-489  Spt-Mir-489  Tgu-Mir-489-v1  Tni-Mir-489-v1  Xtr-Mir-489-v1 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(GCA_003339765.3_Mmul_10_traces)		 CM014338.1: 112622811-112622870 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-489-v1)		 Mir-489-v2 CM014338.1: 112622810-112622871 [+] UCSC Ensembl
Mir-489-v1 CM014338.1: 112622811-112622870 [+] UCSC Ensembl
Mir-653 CM014338.1: 112623903-112623959 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUGACUACUGCUGUUGGUGGCAGCUUGGUGGUCGUAUGUGUGGCGCCAUUUACUUGAACCUUUAGGAGUGACAUCACAUAUACGGCAGCUAAACUGUUACAUAGGACAACAAGAGGUUU
Get precursor sequence
Structure
        10          20        30        40        50         
GCUGACUACUGCUGUUG--|      C     G             CGC     ACUUGA 
                   GUGGCAG UUGGU GUCGUAUGUGUGG   CAUUU      A
                   CAUUGUC AAUCG CGGCAUAUACACU   GUGAG      C
UUUGGAGAACAACAGGAUA^      A     A             ACA     GAUUUC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Star sequence

Mml-Mir-489-v1_5p*
mirBase accessionMIMAT0026883
Sequence 
0- GGUCGUAUGUGUGGCGCCAUUU -22
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Proposed targets TargetScanVert: mml-miR-489-5p
Mature sequence

Mml-Mir-489-v1_3p
mirBase accessionMIMAT0006349
Sequence 
38- GUGACAUCACAUAUACGGCAGC -60
Get sequence
Proposed targets TargetScanVert: mml-miR-489-3p