MirGeneDB 3.0
MirGeneDB ID

Mun-Mir-489

Family name MIR-489 (all species)
Seed GACAUCA
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues
Orthologues Aca-Mir-489-v1  Aca-Mir-489-v2  Ami-Mir-489-v1  Ami-Mir-489-v2  Bta-Mir-489-v1  Bta-Mir-489-v2  Bta-Mir-489-v3  Cfa-Mir-489  Cja-Mir-489  Cli-Mir-489-v1  Cli-Mir-489-v2  Cpi-Mir-489-v1  Cpi-Mir-489-v2  Dno-Mir-489  Dre-Mir-489-v1  Dre-Mir-489-v2  Eca-Mir-489  Gga-Mir-489-v1  Gga-Mir-489-v2  Gja-Mir-489  Gmo-Mir-489-v1  Gmo-Mir-489-v2  Hsa-Mir-489-v1  Hsa-Mir-489-v2  Laf-Mir-489  Lch-Mir-489  Loc-Mir-489-v1  Loc-Mir-489-v2  Mal-Mir-489-v1  Mal-Mir-489-v2  Mml-Mir-489-v1  Mml-Mir-489-v2  Mmr-Mir-489  Mmu-Mir-489  Ocu-Mir-489  Pab-Mir-489  Pbv-Mir-489  Rno-Mir-489  Sha-Mir-489  Spt-Mir-489  Tgu-Mir-489-v1  Tgu-Mir-489-v2  Tni-Mir-489-v1  Tni-Mir-489-v2  Xla-Mir-489-P1-v1  Xla-Mir-489-P1-v2  Xla-Mir-489-P2-v1  Xla-Mir-489-P2-v2  Xtr-Mir-489-v1  Xtr-Mir-489-v2 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(Mun_miRNA_loci)		 489_LR594632.1:133551920-133552059: 40-101 [-]
Precursor
(pre-Mir +30nt flank)
ACCAGGAUCAUAUAUUGCGUGGUGGCUUGGUGGUCGUAUGUAUGACGUCAUUUACUUGGACUUGUAGGAGUGACAUCAUAUGUACGGCUGCUAAACUGCUACACGAGACAUCAUUUCUUCAG
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Structure
        10          20        30        40        50        60
ACCAGGAUCAUAUAUUGC--|   UG C    UG             C      UACUUGG 
                    GUGG  G UUGG  GUCGUAUGUAUGA GUCAUU       A
                    CAUC  C AAUC  CGGCAUGUAUACU CAGUGA       C
GACUUCUUUACUACAGAGCA^   GU A    GU             A      GGAUGUU 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Mun-Mir-489_5p*
mirBase accessionNone
Sequence 
0- UGGUCGUAUGUAUGACGUCAUU -22
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Mature sequence

Mun-Mir-489_3p
mirBase accessionNone
Sequence 
40- UGACAUCAUAUGUACGGCUGCU -62
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